Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2437 ATGGCGACGGAGACGGAACCGGCGGCGACGGTGACGGCGGAGGAGTCCGAGCTAAAAACCTATTGGTGCCACGAATGCGACATGAGCGTTTCCCTTTCCTCTTCACCTTCTTCAATCCCACTACTCTGCCCACATTGCCACACCCACTTCCTCGAACTCATGGACTCCCCCACCCAAAACGACGCCGTTTTACCCCTTCTCCCATCTTCTTCACTCTCCTTCTTCGATTCCCCCTTTTTACATCGTCTCATCCATCACAACAACAACAACGACAATAACGACGTCGTTTTCGACGACCCGCTATCTCTTCTTCTTCCCCCAACAATACCTTCCAAAACGGCGTCGTCTAAACCCTCCGCTATTGTTCCTGTGATCACTGTCACATCCTCGTTGCTCCTTCAGCTCGACCCAAACGGCGTCGTTTCGTGCGCGGTGTGCAAGGACGAAATCGAGGTCGATGCAGAAGCGAAGCAGCTTCCGTGTAAGCACCTGTATCACTCCGATTGTATCACGCCGTGGCTCGACCTTCAAGATTCGTGCCCGCTCTGCCGGTTCCGGCTCACGGCGGCGGAGGAGGAGGAAGAGGGAGAAGAAGATGGTGGTGGCGCGTTGCCGTCGAGCGAGCAGCTGAGGGCGGCGATGGTGAGGCTGTCGGAGCTGATGGATGAGGAGGATGACGATTTCTTTGGGTTGAGGACTACGCTGAATCACATTGCCTCAAGGCATGGCTTGATTGATTCCAGTCATGGTTCTAGGGTCGCTGATGGTGAGGGTGAGGGTGGTGGTGAATAA 792 0.5518 MATETEPAATVTAEESELKTYWCHECDMSVSLSSSPSSIPLLCPHCHTHFLELMDSPTQNDAVLPLLPSSSLSFFDSPFLHRLIHHNNNNDNNDVVFDDPLSLLLPPTIPSKTASSKPSAIVPVITVTSSLLLQLDPNGVVSCAVCKDEIEVDAEAKQLPCKHLYHSDCITPWLDLQDSCPLCRFRLTAAEEEEEGEEDGGGALPSSEQLRAAMVRLSELMDEEDDDFFGLRTTLNHIASRHGLIDSSHGSRVADGEGEGGGE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2437 263 Pfam zinc-ribbon 20 54 IPR039525 GO:0061630
Aev06g2437 263 SUPERFAMILY RING/U-box 142 188 - -
Aev06g2437 263 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 19 243 - -
Aev06g2437 263 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 19 243 - -
Aev06g2437 263 ProSiteProfiles Zinc finger RING-type profile. 143 184 IPR001841 -
Aev06g2437 263 SMART ring_2 143 183 IPR001841 -
Aev06g2437 263 Pfam Ring finger domain 142 184 IPR001841 -
Aev06g2437 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 201 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2437 Aev-Chr6 24515969 24516760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2437 15 231 C3H Transcription Factor Family AT3G60080 35.019 6.74e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2437 K11982 - gmx:100775530 223.787