Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2347 ATGAACAAGATTTCAATACTGGCATTTACACGGTTTACCAAGCTCCCACCTTCCGTTCCATATCCGAACCAACCATCCCGGTTTCGCTTCGGTCAACTGTGGGTCCCGGAAACCACAGCTTCGCTCCTTCGTTCCAGTGCCAAGCATAGGTTCGGACTCCGAGCCTCTTTCCATTCCATTCCAATTCCGTCTAAACCCCAGAGTAGAATTAATTTCCCGCTCACTCAACACAGTCACTATCTTTCTCTCACTGCAGCGATTGAAAATGGAAAAACATCGTCGAACCTGAATACGCTGAACTTGTCTGCTTCTTCCTCACTCACTCGCTATTCTTCGTATGCGTTCGAACCCTCTTCTTGCACTTCATCGATACAATGGCTAGTTGGGAAGTGGTGGACAACGATCGTGTTTGGTATGGCGATAATAAATGGGGATGGAATTTTCATGGATGAGCCACCATTTTTACCCTTGAGCTGGCTTATTGACATAGGAGGGTTTGCCAAGAAAGTCAAAAACACTACTCTGTCTTCAGCTGATCAAATCAAGGATTGTGGAGCACATCGTGAATGTCCAAACTGTCATTATCGTATTGATAACAGTGATGTTTCTACTGAATGGCCTGGACTTCCTGTTGGTGTGAAGTTTGATCCTTCTGATGTAGAACTCTTGGAACATTTAGCTGGAAAATGTGGCATTGGGAACAAACAGCCACACATGTTTGTTAATGAGTTCATCCCAACACTGGAAGGAGAACTTGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCCAAAAAAGATGGGAGCGCCATCCATTTCTTTCACAGAACAGCCAATGCTTATACTACTGGTCAACGGAAGCGTCGAAAAATTCATCATCAGGAAGGTTTGACTGAAGAGCATGTGCGTTGGCATAAGACTGGTAATAACAAAGCTATACTAGAGGATGGATTACATAAGGGCTATAAGAAGATCATGGTTCTTTATATAAGATCTAAGAAAGGGTCCAAGGCTGAAAAATCCAACTGGGTTATGCATCAGTACCATCTAGGGTTTGATGAAGATGAAAAGGATGGGGAATATGTAGTTTCAAAAATCTTTTATCAGCAGCCAAAGAAGGCTGAGAAAAAAGGGAAGAAACCAGTGGCTGAAGATCCTGACAATATGGCGTTGAGAACCAGTCCAAGGACTCCGAAACCAAATCCCCCGAATCCACCTCGAGCAGGAAAAAGTCTTGACTGTGATGATAATATTGAGGAAACTGCAGTGTCTTTTGCCCAGGATGCCAAGCCTAGCCCAGGAGAATCACATGCCCCACTATCTGATGTTCAGGATCGGGACAATGCCGGTGAATTGCAGGCTGTGGAAAACTGTGGTTTTGATGGCTTGGATGACATCTTATTGTGCAAGGAAATATTGGATCCTTCTGCCCTATTAAATGATTCTGGTTTGGACTCCATAACTGTTGATGGCTTTGCTTCCAATCCAAATGAAATGGCTGGAAATGATAATTTATCGTGTGGAGTTTCTGTTCTGGATACCTTGGATTTGGGTACTCCTCCAGATTTTGATCTTTCAAATTTGAATTTTTGTTCTCAAGACAGTATCTTTGACTGGGTTGACAGATTATGA 1635 0.4324 MNKISILAFTRFTKLPPSVPYPNQPSRFRFGQLWVPETTASLLRSSAKHRFGLRASFHSIPIPSKPQSRINFPLTQHSHYLSLTAAIENGKTSSNLNTLNLSASSSLTRYSSYAFEPSSCTSSIQWLVGKWWTTIVFGMAIINGDGIFMDEPPFLPLSWLIDIGGFAKKVKNTTLSSADQIKDCGAHRECPNCHYRIDNSDVSTEWPGLPVGVKFDPSDVELLEHLAGKCGIGNKQPHMFVNEFIPTLEGELGICYTHPENLPGAKKDGSAIHFFHRTANAYTTGQRKRRKIHHQEGLTEEHVRWHKTGNNKAILEDGLHKGYKKIMVLYIRSKKGSKAEKSNWVMHQYHLGFDEDEKDGEYVVSKIFYQQPKKAEKKGKKPVAEDPDNMALRTSPRTPKPNPPNPPRAGKSLDCDDNIEETAVSFAQDAKPSPGESHAPLSDVQDRDNAGELQAVENCGFDGLDDILLCKEILDPSALLNDSGLDSITVDGFASNPNEMAGNDNLSCGVSVLDTLDLGTPPDFDLSNLNFCSQDSIFDWVDRL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2347 544 ProSiteProfiles NAC domain profile. 209 370 IPR003441 GO:0003677|GO:0006355
Aev06g2347 544 SUPERFAMILY NAC domain 194 370 IPR036093 GO:0003677|GO:0006355
Aev06g2347 544 Gene3D NAC domain 218 375 IPR036093 GO:0003677|GO:0006355
Aev06g2347 544 Pfam No apical meristem (NAM) protein 210 351 IPR003441 GO:0003677|GO:0006355
Aev06g2347 544 MobiDBLite consensus disorder prediction 371 387 - -
Aev06g2347 544 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 158 542 - -
Aev06g2347 544 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 158 542 IPR044799 GO:0003700
Aev06g2347 544 MobiDBLite consensus disorder prediction 371 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2347 Aev-Chr6 23054328 23058753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2347 187 374 NAC Transcription Factor Family AT4G28500 54.974 6.85e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g2347 NAM 3.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2347 - - gmx:100780442 587.8