Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2344 ATGGCTGATTCTTCTTTTGATACTGAGTACTACACCCCAAACCACCAGAGACGATACTATGCAACGCCAGTAAGTTATCACAATGTATCATCTCACGGTTCAGGCTCCAGTTTCACCCTATCCATCTCCAATTCCAGAAGAGCACGCCGTAACAGAATTCCTGCGACGCCTTTCGCTTCAGATGATGATCAATCATGGCAAGGAGAGGTTTCATGGAAGTTTGATGAGGCTAGAGGGTGGCGCGAGTTTAGCACAAATTTGGGTTCAGTTCTGAATCCATGGCTAGCTAGCTCCCCATCTAATTATAGCCATGTGTTTCGTCAGTCAGCCAATGAATATTTCCTTTCTCGAACAAGTGGCATCGTCAGAGGCCCCACAAACTCACCTTATCACGAACATTCGGCCGGCTATGGAAGAGTTGAGCTTCAGAGCTATGTAGCTAGGGACAGTGACCATAGTTACTTTGATCAGCAAAGTAAGTCGTCTGGTAGGATCTCAAAATTGGGGATCATCAAAGAGGCGAGCAGTGGAAAAGTTAAGAGCAGTCCACTAGCAGATGACGATGAGCTTAATCTGACAGATTATAGCATATCAGACGATGGGCATCACGATCCTGATATATCATATATTAAAAACGATCATGGTGCGAATTTTGGAAGCCATGGAGGTTATAATCACCAATACGTTGAGAAGATTTCAGGATATGATGAAGATTGTGATAGTGATTTGGAAGAGGAGGATGCAAGGCCTCCAAAGACAGTTGGGCTGTTCAGCTTGTTTAGGTACGCAACCACTTGGGATTGGGTGCTTGTATTTGTGGGTTGTGTAGGCGCTCTCATAAATGGAGGATCACTTCCTTGGTTTTCTTATCTTTTCGGAAACTTGGTTAATAAGATTTCAGGAGAATCATCAAACGGGGAGCAGATGGTGAAGGATGTTGAGAAGATATGCAAATTTATGACCGGGTTAGCTGCAATTGTGTTAGTTGGAGCATATTTTGAGATCACATGTTGGAGGTTAGTCGGGGAGCGATCTGCTCAAAGAATCAGAACAGAGTATCTTAGAGCAATTCTTCGACAGGATATTAGTTTTTTTGATACAGAGATCAACACGGGTGATATTATGCATGGAATTGCAAGTGATGTAGCACAAATTCAAGAAGTTATGGGAGAGAAGGTATATTCTTATTTCTCTAGTTCTAATAAAGAAACAGATAGCTACTTTACATTAATTTATTAA 1239 0.4213 MADSSFDTEYYTPNHQRRYYATPVSYHNVSSHGSGSSFTLSISNSRRARRNRIPATPFASDDDQSWQGEVSWKFDEARGWREFSTNLGSVLNPWLASSPSNYSHVFRQSANEYFLSRTSGIVRGPTNSPYHEHSAGYGRVELQSYVARDSDHSYFDQQSKSSGRISKLGIIKEASSGKVKSSPLADDDELNLTDYSISDDGHHDPDISYIKNDHGANFGSHGGYNHQYVEKISGYDEDCDSDLEEEDARPPKTVGLFSLFRYATTWDWVLVFVGCVGALINGGSLPWFSYLFGNLVNKISGESSNGEQMVKDVEKICKFMTGLAAIVLVGAYFEITCWRLVGERSAQRIRTEYLRAILRQDISFFDTEINTGDIMHGIASDVAQIQEVMGEKVYSYFSSSNKETDSYFTLIY* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2344 412 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 272 399 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g2344 412 PANTHER - 226 395 - -
Aev06g2344 412 Gene3D ABC transporter type 1, transmembrane domain 251 400 IPR036640 GO:0005524|GO:0016021
Aev06g2344 412 SUPERFAMILY ABC transporter transmembrane region 259 398 IPR036640 GO:0005524|GO:0016021
Aev06g2344 412 Pfam ABC transporter transmembrane region 271 397 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g2344 412 PANTHER ABC TRANSPORTER B FAMILY 226 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2344 Aev-Chr6 23004308 23005805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2344 243 397 Calmodulin-binding Proteins AT2G36910 36.774 7.07e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2344 K05658 - gmx:100816700 472.626