Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2315 ATGGATGTTGACAAGGGAAATGAAGTAGATTGCGATGTCAATCAATGCAATAGTGTGGACAGATCAAACAATTTGGTGGCAATAACTGCAGAAGATTTTTATGATAAAGAATTAAGCACCGATGAAGAGTGGTATAAAATGTATTGTATGTATGCCAAATGCGTTGGTTTTGGTGTTAGGAAGGGTGATGTACATCGTGATGAAAACGGAAATCTGACACATCGTAGATTTTTTTGCAATAGAGTAGGTCTGAGGCATGAAAGGGTGTACTTACGTAACCGTAAGAGATATCACAGACCAGAAACTCAGACCAACTGCCACGCAAAGCTGTCAGTATATTTGGACAAAGCTACACAGAAATGGAAGACCAGGAAATTGTTTGAAGATCATAACCATGACCTGACTCTGTTGCCTTTTGTTCATATAATTCCTACACATCGGAGGATTAAGCCTTCTGATAAGGCTCAAATTGATACGATGCATCGTAGTGGCATTTCCACTTCTCAAATTATGGGTTTTATGGTTGGACAAGCAGGTGGTTTTGCTGGTGTAGGATTCTCTAAGAAGGACCCGTATAATTACATTGATAGGTTGAGGCAGACGAGGATATTGGATGGAGATGCAAATGCTGCTCTAAGTTATCTGCAGGGCAAGGAAGTTTCGCAACCCATGTCAGCTGCAAAACTTTGTGGTTGGCATTTGCAAAAAAATGCAAAAAGTAACTTGAAAAGTAGTGGTTTTTGTGAGGCCTTAAAGGCTTTGATATATGGCAATATTGAAGTTGAGGTTTTTGAGGAGATGTGGCAGCAGAACGTTATTTTGTTTGGGTTGGAGGGAAATGAATGGGTAAATAAGTTGTATGAGATGAAGAAGAGTTGGGCCACGACATATTTGCGTGATAAATTTTGTGCAGGTTTTCGAACAACTTCAAGGTGTGAGGGAATAAATTCATTCATTAAAAGGTATGTTTGCTCCAAACACAACATTGTTGAACTTTTTCACAATCTCGATCATGTAGTGGCTGCATATTGTAATAACGAGTTGGAATCTCAATTCAAGTCAATATATGGTGATCTCGTGTTGACCACAGAGCTTGAGGGAGTTAAGCATTCAGCAGCTACTCTATACACAAGGGAGACCTTCAAAGATGTGAAGAAACAAATTGAAGAAGTAATTGCCCTAATTGTTCTTAGCACAGAAAGAATAGAAAGTACGATAATATACAAAGTAGGAAGGTATGAGAGGCTAGGACGTGAGTACACTGTTATGTTTGACAAGACTCTTGACAAGTTTCAATGTATTTGTCAAATGTGGAATGGGTATGGAATCCCTTGCAGTCACTTCTTTTGTGTTATGAAACATGAGCATGTGTTAGAATTGCCGAAATGTCTTGTTTTGAAGAGGTGGTGTAAAGATGCAATGACGTATCAGTCGAATATTGAAGTGGAAGGCGAAGAAGATTCTGAGCAGAATGTGTTGGTACGTTATGGAGCTTTATCCGCTGCAAGCCAGTGGATGTCCTATCTTGGCTCGAAACGACTTGCTTACTTTAGAGAAACTATGGATCAAGTTTGCCGGATTTCTAGTGAATTAGAGAAGAAGTCAGGGTGTTGCGATGGAGCTTCCATGATTGCTGATGAAAATAAGGATACGGATCCGGAAGTTGTACGGTCTAAAGGGGCACCACAAAAGCACAATCATAAGTCTACAAAAAGGCGGTGCTCTAACTGTAACAAGAAAGTGATGCTGATGATTCCGACAAGTGTTGCAGGAATTGATCGGGCATGTGAAGGTGATTTATTGGATGACGAAGTTGATTTTGAACCGAATGTAGTTAAAAATGATTCGGTTACATCACAGCAGGAAAATTTGGAAGAAGGAAGTAATGGTAACAGGTTTTCGTGGCCTGATTTAAAAGTGAACATGCAAAAATCTGTTCATGAAAGCCAAGTTTATGGTGGTCACAACATCGATGTTTTTAACCCAAGGTGCAGGAGTATTGGGAATAAGAGAAAAATCGGCTCCAAAGGTCGACCCGGTTTTTGTGAGATGCTCCTCATTGTTAAGGGTCAATATGGTGTTGGCTAG 2088 0.3989 MDVDKGNEVDCDVNQCNSVDRSNNLVAITAEDFYDKELSTDEEWYKMYCMYAKCVGFGVRKGDVHRDENGNLTHRRFFCNRVGLRHERVYLRNRKRYHRPETQTNCHAKLSVYLDKATQKWKTRKLFEDHNHDLTLLPFVHIIPTHRRIKPSDKAQIDTMHRSGISTSQIMGFMVGQAGGFAGVGFSKKDPYNYIDRLRQTRILDGDANAALSYLQGKEVSQPMSAAKLCGWHLQKNAKSNLKSSGFCEALKALIYGNIEVEVFEEMWQQNVILFGLEGNEWVNKLYEMKKSWATTYLRDKFCAGFRTTSRCEGINSFIKRYVCSKHNIVELFHNLDHVVAAYCNNELESQFKSIYGDLVLTTELEGVKHSAATLYTRETFKDVKKQIEEVIALIVLSTERIESTIIYKVGRYERLGREYTVMFDKTLDKFQCICQMWNGYGIPCSHFFCVMKHEHVLELPKCLVLKRWCKDAMTYQSNIEVEGEEDSEQNVLVRYGALSAASQWMSYLGSKRLAYFRETMDQVCRISSELEKKSGCCDGASMIADENKDTDPEVVRSKGAPQKHNHKSTKRRCSNCNKKVMLMIPTSVAGIDRACEGDLLDDEVDFEPNVVKNDSVTSQQENLEEGSNGNRFSWPDLKVNMQKSVHESQVYGGHNIDVFNPRCRSIGNKRKIGSKGRPGFCEMLLIVKGQYGVG* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2315 695 SMART 26again6 431 458 IPR006564 GO:0008270
Aev06g2315 695 PANTHER OS03G0181600 PROTEIN 223 501 - -
Aev06g2315 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 223 501 IPR031052 GO:0006355
Aev06g2315 695 ProSiteProfiles Zinc finger SWIM-type profile. 420 456 IPR007527 GO:0008270
Aev06g2315 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 223 IPR031052 GO:0006355
Aev06g2315 695 Pfam FAR1 DNA-binding domain 47 135 IPR004330 -
Aev06g2315 695 MobiDBLite consensus disorder prediction 550 572 - -
Aev06g2315 695 PANTHER OS03G0181600 PROTEIN 35 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2315 Aev-Chr6 22648991 22651838 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev06g2315 FAR1 3.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2315 - - ahf:112713074 334.339