Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2310 ATGGCATCATCCAGCTACTCGAACTCTCCCTGTGCTGCGTGTAAGTTTTTGAGAAGAAAATGCATGCCAGATTGCATTTTCTCCTCATATTTTCCTCCAGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATATTTGGTGCAAGCAACGTGAGCAAACTCCTCAACGAAGTTCAACCTCACCAGAGGGAGGATGCTGTGAGCTCTCTGGCCTACGAAGCGGAGGCCCGGATAAAGGATCCTGTTTATGGCTGTGTTGGAGCCATTTCAGTTCTCCAAAGGCAAGTTATTAGGCTCCAAAAGGAGCTTGATGCCACAAACGCAGATTTGATCAGATTTACCTACAATGAAATTGCGGCAATTCAAGACGGGAGAAGGATGTGTGAAGCTGAAGGAGGTTCGTCTCTTTCTCAGTCTCAGTCTCTTGCCTATAACTATTATCCATCTCCTTGGAGTAATGATGTTTGTGGGGATGGTTGTCGTCATAGAGGAGGTGATAACAATATGTGA 510 0.4529 MASSSYSNSPCAACKFLRRKCMPDCIFSSYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVSSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRFTYNEIAAIQDGRRMCEAEGGSSLSQSQSLAYNYYPSPWSNDVCGDGCRHRGGDNNM* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2310 169 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aev06g2310 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 156 - -
Aev06g2310 169 Coils Coil 89 109 - -
Aev06g2310 169 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Aev06g2310 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2310 Aev-Chr6 22593042 22593551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2310 4 126 AS2 family AT3G27650 74.603 4.94e-67 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev06g2310 LOB 2.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2310 - - var:108328620 268.47