Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2297 ATGGGACATGGCGTCCCATGTGCCGGTCACGTATTCGAGTTGGGTCGTGACAAGCTGTATGCAACTTTTTCATCTTTATATTTCTGGTGCATCGCCGATATGAGCATGCCTTACAATGATATAGTCCGATTTGGTTTTCAGTTAGTCAGGTTAAGGGTGATAAGGTTGTGGACTGTTCCTTTTTTTTCAAGCTCTTCTACACCTGGATCAATTGAAATGGTTTTACTTGATGAGAATGCCAGACATATGCTTTTTCTAACTTCAATGTTGTCCATTCCAATGTATGGCATTTCAGCCATTCTTTTCAACAAGATACTTTCAACACAAGACGAATTTGATTATCTAATTGATGTTGTTGGGATCGTGACTGCTGTTGGTCCTGTGAAGGAATATGCCCGTGAAGGAAAGACCTCTAAGATGATTGTTATTGAACTCAGTGCAGAGAACCTGCAATTGGAACTAACTTTGTTTGGTGAGTATGTTGAGCTTCTTCTGAAAATGGAACTAAAAAGTGAACTAAAGCTTCCTATTTTAGTTATTCAACTCGCAAAAGTTAGGATCTTCAGAGGCAAAGTTGGTGTGCAGAATGTTATGTTTACTTCTAAATTAATGCTGAATCCTGATGATCATGAAGTTAATCTTTTCAGGGATAGCATATCAACTCCTGGAAATGAAGGATCTAAGTTCTCCATTAAGATCAATGATTCTTCATCTGGGACTGTGGAAGATGACTTTTTGAAGTTAACTCCAAGGAGTTGTATTGACAAATTAACTGAGAATGAAGAGAGTGTTGAAGAATATGAATACCCTGTTGTTTTTAATGATCTCATTGGCAAAAAAATGTTGTTCAAGATTGAAAATAGGAAGGTTTCAAATAATAGGTACTATGGCACATTTAGAGTTAAGAAAGTGTGCAATGATTCTAATTTGATTGGTATGTTCGAACTTGAAGGATCCAATTTGACTCCTCTTAAGGATACCTTCACTCCTCCATTCACCTACACCGTTGATTTGACTTCAGACCTTGGTTTTATTCCCTCCATCAGTGGTCTAAAAAATAACCTTTCAAATGTTGTCATGACTTCTTACCCTTCTACTAATTGTGAGATACTTGGAACGAGTGATGTAATGGGTTTTACTCCTGCCAAAAGGAGTTTAGCGGATGCTTTTGATGAAGTTGGTGGGGTGCAGAAGGAGGCCAAGATTATGCAAGATTCTGAAGAGGTGGACTAA 1233 0.3796 MGHGVPCAGHVFELGRDKLYATFSSLYFWCIADMSMPYNDIVRFGFQLVRLRVIRLWTVPFFSSSSTPGSIEMVLLDENARHMLFLTSMLSIPMYGISAILFNKILSTQDEFDYLIDVVGIVTAVGPVKEYAREGKTSKMIVIELSAENLQLELTLFGEYVELLLKMELKSELKLPILVIQLAKVRIFRGKVGVQNVMFTSKLMLNPDDHEVNLFRDSISTPGNEGSKFSIKINDSSSGTVEDDFLKLTPRSCIDKLTENEESVEEYEYPVVFNDLIGKKMLFKIENRKVSNNRYYGTFRVKKVCNDSNLIGMFELEGSNLTPLKDTFTPPFTYTVDLTSDLGFIPSISGLKNNLSNVVMTSYPSTNCEILGTSDVMGFTPAKRSLADAFDEVGGVQKEAKIMQDSEEVD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2297 410 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 36 308 - -
Aev06g2297 410 CDD RPA1_DBD_B_like 117 218 - -
Aev06g2297 410 Gene3D - 91 230 IPR012340 -
Aev06g2297 410 PANTHER REPLICATION FACTOR A 1, RFA1 36 308 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev06g2297 410 SUPERFAMILY Nucleic acid-binding proteins 103 222 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2297 Aev-Chr6 22270786 22294535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2297 111 247 Core DNA Replication Machinery Family AT2G06510 28.169 1.33e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2297 - - aip:110271971 181.415