Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2267 ATGGGAAGACAGCCTTGTTGTGATAAGGTTGGTCTAAAAAGAGGACCGTGGACTATTGAGGAAGATCACAAGCTCATCAACTTCATCCTCAATAATGGCATCCATTGCTGGAGAATGGTTCCCAAGCTTGCAGGTCTGCTAAGATGTGGGAAGAGCTGCAGATTGAGGTGGATTAATTACCTGAGGCCAGACCTCAAGAGAGGTGGCTTTACAGAAATGGAAGAGGATCAAATTATACAGCTACATTCTCGCCTTGGTAACAGGTGGTCTAAGATTGCTTCACATTTTCCTGGGAGGACAGACAATGAAATCAAGAACCATTGGAACACAAGAATCAAGAAGAGGCTAAAGCTCCTTGGACTGGACCCTGTGACCCACAAGCCAATTATTGACCATAAGGAACAAAATGATGATATTGAGGACAAAAATAAGTCCAACCTTCAGCCAACTCTTTCCAAAGAGCCTGAAGAAAATGAGGAGATGACAAAAAGAGAAGAAAACAAAGTGAATTGTGATGATACTGCCTCTGAACTTCTAAACAATTTTGAAATGCTATGCTCCGAGTTGGACTTGGGATTATGGATGGGCCAGGAAGCCAAAAACAGTACTAGTTCTTACTGCACTAGTTCTTCTATTTCTCTGGAAGATTCTAATAATAACATTTCTATGAGCCATGACCATGAATCCCCTTATCCTCAGGAAAACAACCTACAACAATGGGTTGAAAATATTGATTCCATTCTCTCATGGGATGGCTTCAGTGCCCTTGACCAAGATATTTTCTTCTAG 789 0.4157 MGRQPCCDKVGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSRLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKLLGLDPVTHKPIIDHKEQNDDIEDKNKSNLQPTLSKEPEENEEMTKREENKVNCDDTASELLNNFEMLCSELDLGLWMGQEAKNSTSSYCTSSSISLEDSNNNISMSHDHESPYPQENNLQQWVENIDSILSWDGFSALDQDIFF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2267 262 MobiDBLite consensus disorder prediction 153 167 - -
Aev06g2267 262 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev06g2267 262 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g2267 262 SMART sant 13 63 IPR001005 -
Aev06g2267 262 SMART sant 66 114 IPR001005 -
Aev06g2267 262 CDD SANT 16 61 IPR001005 -
Aev06g2267 262 MobiDBLite consensus disorder prediction 130 167 - -
Aev06g2267 262 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev06g2267 262 PANTHER MYB DOMAIN PROTEIN 40 2 244 - -
Aev06g2267 262 Gene3D - 69 116 - -
Aev06g2267 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev06g2267 262 CDD SANT 70 110 IPR001005 -
Aev06g2267 262 Gene3D - 11 67 - -
Aev06g2267 262 MobiDBLite consensus disorder prediction 130 144 - -
Aev06g2267 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev06g2267 262 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 244 - -
Aev06g2267 262 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Aev06g2267 262 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2267 Aev-Chr6 21804821 21807911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2267 1 166 MYB Transcription Factor Family AT5G16600 66.265 1.26e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g2267 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2267 K09422 - gmx:100783231 384.03