Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2251 ATGGTTAGTGAAGACCAAAAATGGAGCCCCAGAAACCAGAAGAACACTTCAATCGAGGGGAATGCCCAAAACGTGGACACCCTTTTGAGCCCTAGATTCAAATCAGCGGCTGCTATGGCCGGTTGGGATGAGGAGGCTCTGCTCCTTGCGAGTCTCATCGTCGAAGACACACCCGATAGAGATTTTAAGCACAAGAGGCGCTCTGTCTTGAACTCAAAGACACCACCCACCAATTCAAGAAGGAAACGAAGAGCTCAGAGGAGTCCACAATCAATCCCAGTGGCTGTTCTTGATCTTGATGAAGAAGAGACTCCGAGAAAGGAAAGAAGTGGTAAAAAGAAGAAAGAAAAGAAAACTTGTGGTAATGAAGCAAGTAAATTAGAAGGGAATGAATTGAACGATGAGAAATCTAGTGTACCTTCCTTCAGTTCTGCTCTTCCCTGTATTGACAAGCTCAGGGAGGAGCTTTCCTGCGCAATTTGTTTGGAGATATGTTTTGAGCCAAGTACCACTCCTTGTGGCCACAGCTTTTGTAGAAAATGTCTTCGGTCTGCTGCAGACAAGTGTGGCAAAAAGTGCCCGAAGTGCAGGCAATTAATAAGCAATGGAAGGTCTTGCACTGTGAACACTGTTCTCTGGAACACAATACAGCTCCTGTTTCCACAGGACGTTGAATCGAGGAAAGCGGCCGGCGCCATAAACATTCGTGAAGCAGCAGCAGCATCGGCTCAGAGCGCGAGTCCAGAAACAGCATTTTACAATAACCTCAGGAATGGAAGCACAACACAAGCATCAACCAGATTTGTGAGTACAAGGAGAAGTAGCAGCACACGTGATGAGGATGCTGCACTGGCGAGAAGGTTGCAAAGAGAGATTGGTGGTGGCAATTCAAGGAGCCGAACGCCATTATCATCGTCATCATCATCTGGTTTAGGTACAAGAGTGAGGTCTTCAAGAAGAGGTGTGGTTTCTAATAGCCAAGATGAGGATGCTGCATTTGCTCTGAGGTTGCAGAGAGAAGAGTTCATGCAGGCTTTTAGAGGGGGAACCCAGGAACAATCAACAAGACCAACCTCCATAACTTCTGCTAGAGAAAATTTGAGGGCCTTGGCATCTAGAGCTATGGATCTTCGCGTTAGAGATCGAAGAGTTTGA 1155 0.4667 MVSEDQKWSPRNQKNTSIEGNAQNVDTLLSPRFKSAAAMAGWDEEALLLASLIVEDTPDRDFKHKRRSVLNSKTPPTNSRRKRRAQRSPQSIPVAVLDLDEEETPRKERSGKKKKEKKTCGNEASKLEGNELNDEKSSVPSFSSALPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQDVESRKAAGAINIREAAAASAQSASPETAFYNNLRNGSTTQASTRFVSTRRSSSTRDEDAALARRLQREIGGGNSRSRTPLSSSSSSGLGTRVRSSRRGVVSNSQDEDAAFALRLQREEFMQAFRGGTQEQSTRPTSITSARENLRALASRAMDLRVRDRRV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2251 384 MobiDBLite consensus disorder prediction 289 327 - -
Aev06g2251 384 MobiDBLite consensus disorder prediction 62 136 - -
Aev06g2251 384 PANTHER UNCHARACTERIZED 20 238 - -
Aev06g2251 384 PANTHER UNCHARACTERIZED 304 382 - -
Aev06g2251 384 ProSiteProfiles Zinc finger RING-type profile. 158 197 IPR001841 -
Aev06g2251 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 227 IPR013083 -
Aev06g2251 384 MobiDBLite consensus disorder prediction 294 325 - -
Aev06g2251 384 PANTHER - 304 382 - -
Aev06g2251 384 Pfam Zinc finger, C3HC4 type (RING finger) 158 196 IPR018957 GO:0046872
Aev06g2251 384 MobiDBLite consensus disorder prediction 263 282 - -
Aev06g2251 384 SMART ring_2 158 196 IPR001841 -
Aev06g2251 384 PANTHER - 20 238 - -
Aev06g2251 384 MobiDBLite consensus disorder prediction 99 133 - -
Aev06g2251 384 MobiDBLite consensus disorder prediction 1 26 - -
Aev06g2251 384 SUPERFAMILY RING/U-box 150 221 - -
Aev06g2251 384 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2251 150 271 C2H2 Transcription Factor Family AT5G39550 31.783 2.12e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2251 - - gsj:114390146 418.698