Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2218 ATGTGTAACAAGAATAGTCCTCCGCCTACTCCCACTCCTACTCCGCCAGATACACAAGCCAGAAAAAACACAATCATGAGGAGGAAGAAGAAGATCCGAAAACAAACCAAGGATTTTTCGTCTTCTTCAACTAATTCTTCAACCACCTCTTCACTTAAACCGCTCAAGCGAAGAAACAGAACCAAAACCAGAAAGCCCAAGTACCTCAGTCTCCGCCTTCAACTCTCTCAGAACACCGACAAGAAGAGTCAACAAAAAAAGACGAAAATGACCCCACAACAACAAAAAACCCAACCACCACATCTGAACCTCTTCTTCCCTCTCCACCCAGAAAATACGGACGACGACGAAAAGGACATCATCATGCACGAGGAGAACAACGTGGCGCTTCTCTTCAGCTCCGACGGCGGGGCCACCCTAAATGGCCTGCTCGAGGACGAATCCACAACCACGGACACAACCACCACCGCCGCGTCGGAGGAGGCATCGTTCTCGCCACCGGCGGTGGATGGGAGCGGCGATGGCGATGGGGGGAGCTGGCTGGTGAGGAAGGCGATGAGGAGGAGGGAACAGGGTGAGGAGGAGAGGTGGGTGTGTTACTCGGAGGTGACGAGTGGAGGTGGAACGACGTCGTATGGGTCGTTGTCATTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAGCGCTCCCTTTACGTAGCAGGGGAGGCCCCACAGACTGTCCCTGATTTGCACAATGATGTCCTAGGCCTCCTCTATAATGCTCTTCCTCCCAATACTTCATGTGATGGGTGGGGCAGTGATGCTATAGGGAACACATGGAGTGTTCCAGAAATTTGTGGAGCTAACATGATGAAGATGAAGGAAGAAATGGGTTGGAAGCTGGGGCAGAGAGAAGCTAGTGTGCAGAGATACAAGGAGAAGAGGCAAAACAGGCTCTTTTCTAAGAGGATCCGCTATGAAGTTCGCAAGCTCAATGCCGAGAAACGGCCTAGAATGAAGGGACGATTTGTGAAGAGGGAATGA 1035 0.5121 MCNKNSPPPTPTPTPPDTQARKNTIMRRKKKIRKQTKDFSSSSTNSSTTSSLKPLKRRNRTKTRKPKYLSLRLQLSQNTDKKSQQKKTKMTPQQQKTQPPHLNLFFPLHPENTDDDEKDIIMHEENNVALLFSSDGGATLNGLLEDESTTTDTTTTAASEEASFSPPAVDGSGDGDGGSWLVRKAMRRREQGEEERWVCYSEVTSGGGTTSYGSLSLKLDHEGILNAWSDKRSLYVAGEAPQTVPDLHNDVLGLLYNALPPNTSCDGWGSDAIGNTWSVPEICGANMMKMKEEMGWKLGQREASVQRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2218 344 MobiDBLite consensus disorder prediction 1 104 - -
Aev06g2218 344 MobiDBLite consensus disorder prediction 38 54 - -
Aev06g2218 344 Pfam CCT motif 301 343 IPR010402 GO:0005515
Aev06g2218 344 MobiDBLite consensus disorder prediction 148 180 - -
Aev06g2218 344 ProSiteProfiles CCT domain profile. 301 343 IPR010402 GO:0005515
Aev06g2218 344 MobiDBLite consensus disorder prediction 1 16 - -
Aev06g2218 344 PANTHER CCT MOTIF FAMILY PROTEIN 47 344 - -
Aev06g2218 344 MobiDBLite consensus disorder prediction 148 162 - -
Aev06g2218 344 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 47 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2218 Aev-Chr6 21193716 21204802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2218 214 343 C2C2-CO-like Transcription Factor Family AT1G73870 40.769 1.38e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev06g2218 CCT 1.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2218 - - adu:107494886 338.961