Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2200 ATGGCGTTCGATCCAAACTTCTCAGAGAATTTCTCTCTCATTTCTTCTGGGATTTTCCCAGAAAATCCATCCATTAAGACAGAGACCCTCACTATGCCTAATCCATTGCTGCATACAAGCTCTCCGCTAGTACCACCTCCACCAAATAACAACACCTTCTTGTATCACAACAATTTCCACCATTTTGCAATGGACGGTTCTTCTTCATCCTCCATGAACCCCATCACTATGATCCCAGTACCCCCTTCGGTTAATAACCCATACCACTCTCACTCTGCTTCTTTAAGAGACTTTGCTGCAAATGGCTATTACCCCCAAATGGGATTTTCACCAAACAGCACCAACCAAATGGATGCCATGCAAGGTCTTTGGGATTACTCCCAGAAAATCGGCCCAATTCAGCTTGGTGCTACATCATCGCAAACTCAGATGGGTCCTTCTTCTCTGTTGGCAATGCCATCACTGATTTATGATACTTCTGCTGGATCCGTGTCAGTGAATCCTAATTGGCTTCAAGAGGAGTTTCTTCCTACCCTCGGTGTCACTGCAAATGGAAATATTGGTGACTTGAACATTGACCAGAAACCTGTTGCTCTCGGCAGGAGGCCCCTGAGGAGGATGCTGAGGAGAAAGGCGAAAAGTTCGCGCAAGGTCACCGGCATAATCAAAGGCCAGTGGAGTATGGATGAAGACAAAGTGCTCACTGGGCTGGTGCAACGCTTCGGGCATAAAAAATGGTCCTATATCGCCAAGCTATTGAATGGGAGGATAGGGAAGCAGTGCAGAGAAAGATGGTACAACCATCTCCGACCGAATATTAGGAAGGACTCATGGGATGAGGAAGAGGACAAGATACTTATTGAAGCTCACAAGGAAGTTGGGAACAAATGGGCCGAAATTGCGAGGAGGCTACCTGGCCGTAGTGAGAACACAATCAAGAACCACTGGAACGCCACCAAGCGCCGCCAGAGCGCCAAGAAGAAGAAAAACAAGCGCACCACCAGTTCCAAGGAATCACTGCTTCAGAGCTACATCAGGCAAGTCATTGCTGCAGAAGAAGCTGGAAGGGAGCTGAAGAAATCGATAAAGAAGTTGAAAATAAAGACTGAGCACCGCAGCACTGACCATGATCCAGCTCCTCCAATTCTGGTTCGGAACAAGAACTCAGAGGGCAACAACTTTAGTAGTGAGGATATCTGGGATGGGCAGGTGCAGAGTGATGCTGGTTGGAATCTGCAGGAGCATGTGCGAGTGATGGTCAATGGTGATGAGATTGGCAATGGGTCTGTTGTTGGTGATGGGACAATGAATTATGGGGTGCTGGATATATGA 1332 0.4745 MAFDPNFSENFSLISSGIFPENPSIKTETLTMPNPLLHTSSPLVPPPPNNNTFLYHNNFHHFAMDGSSSSSMNPITMIPVPPSVNNPYHSHSASLRDFAANGYYPQMGFSPNSTNQMDAMQGLWDYSQKIGPIQLGATSSQTQMGPSSLLAMPSLIYDTSAGSVSVNPNWLQEEFLPTLGVTANGNIGDLNIDQKPVALGRRPLRRMLRRKAKSSRKVTGIIKGQWSMDEDKVLTGLVQRFGHKKWSYIAKLLNGRIGKQCRERWYNHLRPNIRKDSWDEEEDKILIEAHKEVGNKWAEIARRLPGRSENTIKNHWNATKRRQSAKKKKNKRTTSSKESLLQSYIRQVIAAEEAGRELKKSIKKLKIKTEHRSTDHDPAPPILVRNKNSEGNNFSSEDIWDGQVQSDAGWNLQEHVRVMVNGDEIGNGSVVGDGTMNYGVLDI* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2200 443 MobiDBLite consensus disorder prediction 311 338 - -
Aev06g2200 443 SMART sant 222 271 IPR001005 -
Aev06g2200 443 SMART sant 274 322 IPR001005 -
Aev06g2200 443 CDD SANT 226 269 IPR001005 -
Aev06g2200 443 SUPERFAMILY Homeodomain-like 220 316 IPR009057 -
Aev06g2200 443 PANTHER MYB DOMAIN PROTEIN 100-RELATED 206 365 - -
Aev06g2200 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 269 IPR017930 -
Aev06g2200 443 MobiDBLite consensus disorder prediction 319 333 - -
Aev06g2200 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 270 324 IPR017930 -
Aev06g2200 443 PANTHER MYB PROTEIN-RELATED 206 365 - -
Aev06g2200 443 Pfam Myb-like DNA-binding domain 223 269 IPR001005 -
Aev06g2200 443 Pfam Myb-like DNA-binding domain 275 317 IPR001005 -
Aev06g2200 443 ProSiteProfiles Myb-like domain profile. 223 269 IPR001005 -
Aev06g2200 443 ProSiteProfiles Myb-like domain profile. 270 320 IPR001005 -
Aev06g2200 443 Gene3D - 222 274 - -
Aev06g2200 443 CDD SANT 277 320 IPR001005 -
Aev06g2200 443 Gene3D - 277 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2200 Aev-Chr6 20854735 20859361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2200 213 348 MYB Transcription Factor Family AT4G18770 62.500 2.35e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g2200 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2200 K09422 - gmx:100805329 252.292