Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2198 ATGGGCAATGCAGAGAGGTCGAGGATAATTATGGTTGGTGACACTTTGAAGAAAGTTGGCGATTCGTCTAAGAACACGCTCGTCGAGATTAAAGATGTTGGAGACACACAGAAGGTGCTAAAGGAGCAAACGAGTTCTTTTAGCCTGGTTCTTGAGAGGCCCACATCTCCTTTTCCCATTCAACTACTGCATAAAATGAATGATCTCGAAGTTTTGTTTAATAGAGGTCGAGTTCCTATTGTCACCTGGAACAAGACACTATTGGCATCTAATTTACAGCCATCTAATGAGAGCCATGGGAATTCTGGGTTTTTGATGTTCAACTCAAAGTTTCTAAAGTCAAAAGGAAGCAAGTTATTGAGCAACCAAAATCAACATGCCATCACCCACGGTGAGAGAAACTTCTTAACCCAACAAACAGCTCAACTTGCTTGTGTTTTTACGGAAGAAGCCTGTGGAGATGGAGAGTGGGCTCATGGAAGTTTTCCACTCGAGGAATATATTCAGGCTCTGGACCGTTCCAAGGCTGAGATGTACTATAATCATTCCCTTGGTATGCGCTATAGTAAGATTACAGAGCAAATTTATGTGGGATCCTGTATACAAACAGAAGATGATGTGGAAACCTTGTCAAAAGTTGAGGGAGTTACTGCTGTTCTGAACTTCCAGAGTGGAACTGAAGCTGAAAATTGGGGAATCAGAGTAAAATCAATCAATGACTCATGTCAAAGGAATAATATTCTCATGATCAACTATCCTATACGGGAGGGGGATTCTTATGATATGAGAAAGAAACTCCCATTTTGTGTGGGGCTATTGTTACGGCTGCTGAGGAAGAATCTTCGTTGCTATGTAACTTGCACATCTGGGTTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTGCACTGGATGACAGATGTTTCCCTTCATGCAGCCTATACATGGGTCACTGGGATGCACACATGCAGACCTGACAGGCCGGCAATTGCATGGGCCACATGGGATCTTATAGCTATGGCTGAAAGGGGAAAACACGATGGACCTCCCACACATGTCGTCACATTTGTCTGGAATGGTCATGAGGGAGAGGATGTAACATTGGTAGGAGACTTTACTGGTAACTGGAAAGAACCTCTCAGGGCTGTGCACCGGGTTGGATCAAGGCACGAAGTTGAAGTTAAACTTCCACAAGGAAAATACTACTACAAATTCATTGTTAATGGACAGTGGAGGCATTCAACTGCTTCGCCAGCTGAAAGGGATGATAGGGGTAATGTTAACAATATAATAGTCATTGGTGAAACTGCCAGTGTCCAGCCTTCTGTTCAGCACCAGCAGAAAGATGCAAATGTTGTCAAGGTGATTGAAAGGCCTTTGAATGAAAAAGAGCGGTTTATGCTGGCCAAAGCAGCTCGTTGCATCGCTTTCTCTGTTTGTCCAATCAGATTAGCTCCGAAGTAA 1464 0.4358 MGNAERSRIIMVGDTLKKVGDSSKNTLVEIKDVGDTQKVLKEQTSSFSLVLERPTSPFPIQLLHKMNDLEVLFNRGRVPIVTWNKTLLASNLQPSNESHGNSGFLMFNSKFLKSKGSKLLSNQNQHAITHGERNFLTQQTAQLACVFTEEACGDGEWAHGSFPLEEYIQALDRSKAEMYYNHSLGMRYSKITEQIYVGSCIQTEDDVETLSKVEGVTAVLNFQSGTEAENWGIRVKSINDSCQRNNILMINYPIREGDSYDMRKKLPFCVGLLLRLLRKNLRCYVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMAERGKHDGPPTHVVTFVWNGHEGEDVTLVGDFTGNWKEPLRAVHRVGSRHEVEVKLPQGKYYYKFIVNGQWRHSTASPAERDDRGNVNNIIVIGETASVQPSVQHQQKDANVVKVIERPLNEKERFMLAKAARCIAFSVCPIRLAPK* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2198 487 Gene3D Protein tyrosine phosphatase superfamily 180 448 IPR029021 -
Aev06g2198 487 SUPERFAMILY E set domains 350 434 IPR014756 -
Aev06g2198 487 CDD E_set_AMPKbeta_like_N 354 433 - -
Aev06g2198 487 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 178 320 IPR029021 -
Aev06g2198 487 Pfam Glycogen recognition site of AMP-activated protein kinase 354 436 IPR032640 -
Aev06g2198 487 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 2 487 IPR030066 GO:0005983
Aev06g2198 487 Gene3D Immunoglobulins 341 437 IPR013783 -
Aev06g2198 487 ProSiteProfiles Dual specificity protein phosphatase domain profile. 187 346 IPR020422 GO:0006470|GO:0008138
Aev06g2198 487 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 2 487 - -
Aev06g2198 487 CDD DSP_laforin-like 186 332 IPR045204 GO:0019203|GO:0046838
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2198 Aev-Chr6 20791014 20813575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2198 39 487 Protein tyrosine phosphatase (PTP) family AT3G01510 68.597 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2198 - - gmx:100814503 913.679