Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2174 ATGGATTACCGAATTGAGGGTGCAGAAACTCACAGGAATAAGTGTGTAGCATGCTTCAGACAGTTCAACAAGCTTGAGCACCTCGTGGAGCACATGAGGATCTCATACCATTCGCTTCATGAACCGACCTGTGGAATTTGCAGGAAACACTGCAGGTCATTTGAGTCTCTTAGGGAACATCTCATAGGTCCATTGCCAAAACAGGAATGCCGAGATATTTTTGCTTACCGAGGGTGCAAGTTTTGCTTGAAAGTCCTAGATAACCCTAACTCTCGCAGGATCCACCAAGAAAAATGCCAATTCTCAGGATTAACTGCTGGAATAATTGGTCGCTTTACAAACTTGGGTCTTCGTGATAATTTGACTATTGGTGGGGGAGGAAGAGGACCACCACAAGCAGTTGCACTTGCTTGTAAAATGGTTGGTGGGGGCAGCGATGGTTCACTCGATCTTTGTGCAAGAATCTGCATAATCGATGAGCATGAGAACATCATCTTCCATTCTTATGTGAAACCACCAATTCCAGTGACAAACTATAGGTATGAGACAACTGGCATTAGACCAGAATACTTGAGAGATGCAATGCCACTGAAGCAAGTTCAGAGGAGGATCCAAGACTTCCTTTGCAATGGAGAACCTATGTGGACCATTCGTGCAAGAGGCGGAAAAGCCAGGATTCTTGTGGGTCATGGTTTAGATCATGACTTAGAATGTCTCCAAATAGAATACAGAGCAGAAAAAATAAGGGACACTGCAAAGTACCCTCCTCTGATGAAAACAAGCAAGCTGAGCAACTCTCTCAAGTACTTAACACAAGCATATCTTGGGTATGACATTCAGACAGGGATACAGGATCCATATGATGATTGTGTTGCAACAATGAGGCTATACAGGAGAATGAGGGCCCAAGAACATAAAGTAGAGGATTTCCCTTTGGCATCTGACCCACAGAACAGGAATAACTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGACTCCTGAACAAATGCTGGAAATCTCAAGGTCTGACTATTACTGCTGGTGCATGGATTCCTATATATAG 1068 0.4373 MDYRIEGAETHRNKCVACFRQFNKLEHLVEHMRISYHSLHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFAYRGCKFCLKVLDNPNSRRIHQEKCQFSGLTAGIIGRFTNLGLRDNLTIGGGGRGPPQAVALACKMVGGGSDGSLDLCARICIIDEHENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPLKQVQRRIQDFLCNGEPMWTIRARGGKARILVGHGLDHDLECLQIEYRAEKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYDDCVATMRLYRRMRAQEHKVEDFPLASDPQNRNNFASWRQSELERMTPEQMLEISRSDYYCWCMDSYI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2174 355 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Aev06g2174 355 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 7 353 - -
Aev06g2174 355 PANTHER OS02G0709000 PROTEIN 7 353 - -
Aev06g2174 355 SUPERFAMILY Ribonuclease H-like 146 301 IPR012337 -
Aev06g2174 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Aev06g2174 355 SMART exoiiiendus 132 306 IPR013520 -
Aev06g2174 355 Pfam Exonuclease 151 297 IPR013520 -
Aev06g2174 355 Gene3D - 130 316 IPR036397 GO:0003676
Aev06g2174 355 CDD REX4_like 134 298 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2174 Aev-Chr6 20222224 20224780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2174 1 353 C2H2 Transcription Factor Family AT3G27970 74.648 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2174 - - gmx:100813973 678.322