Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2095 ATGGCTGCCAACGCTAGTGTTTCTAGCAGGACCCGAAAGAAGACGGCTTCTTTCTATCGCAGTCTCTTACCTGGTCATTCATCTTCTGAGGGCGGTGGTTCCAGCCAACGCCAGATGACTGGGAAGAAGAGAGGTAGAGGAGCGCGTGAAAAGAGACGTGAGCCGGATGTGGTGTTCTTGGGTGAAAAGGTGGAACCTGATTTAGGAGCTAGAGCTAAAGCTGAAACTTTATCATCATCATCTAGGTCCAATGGGAAAAAGAGGAGCAAAAGGAAAATTAACGATGATTTTGTGTGTTTGGGAGAGTTCATCGATGAAAGGGAATGTGGTGAACAAAGGAGGGAGTCGTTTGTCCTGCCTCCACCTAAAGAGGTGATTGATCTTGTTGAAAGTGACGATATGGGAGACGACGATGAAGAGAACAGAGGGAGTCATGTGTCTACCGATAAAGGTAAAAGCTTCGTCAACGAGGAACATGGTTTGAGACCCGAAAAGCCTATAACAATTGATTTTGGTGGAGGTTGTGAAAGTGAGGGTGTAAGCGAAGATGACGATGAAAGTGATTCAGTATCTTATTTTAGCTCTTCGAGTGATACCAGAGATTATGGTGAGTCCAGCGACGAAGATTTCATAGCAGATGATATAAGAGATGACTCGAGCAGTGATGATTATTCATCTTCTTACGATGATGAGGATGAGAAGGAAAAGCGAAGGATCAGAAATAATAACTACGAGAAGAATAAGAGTAGTGGGCCGCCTCGGGCAAAGAAAATTTCACGTTTTGATGAAGGAACCTCTTCTTCTATGGATCAGGGGAGAAAGGTGGAGACTGAGAGTTCTGCAATAATCAAGAGAAACGGTGAGAGTTCAGCGTCTTTAGATGATGAATGTGGTGGGCAAGATCAAGATCTTTGGAAGGAGGCAGATTGTGCTAGTGTTACCTCTGGCTCTGGAGAAGTAAAAGGAAAGAAATCGGATGCAAAGAGACCAGAAAGAACAGGCGAAAATGAAGGTGCTGATGTTGAAGCATCTGGTGATTCCCATGATCATTTTCATGTCTCGAAACCTTGTGACGATGAAGCGGAAAAGCATAAGGAGAAACAAAATGGCTGGAGTGGTCGTCAAGGTGTGTCAATACACAAGGAAAGAAGGGATTCAACGTCCAAGATTGATGAAAGGATGGAAAATGTGAAGGAAAGAAGGGAAAACAAGGAGAGTAGGAAAGATAGGGAGGTCATTGGGAAGCATAAGGGTTGGGTTAATAGCAAAACTAGTTATAGAGATTGGGAGCGTAATGTTCAAAGAAATCCATCTAGGCTAAAGGAGGTGCATTTAATTGAACTCCTTGCTGAATGCTTCTTGAGGAAGCACAGTACCATTAGAGATGGTCGGAGCTGGTTACAAGAAAAAGATGATGGTCATGTTCACTGGCGAGATACTCGGCTCCCAATGCAGACACTTTCATCAAATTATAATTTTGGGGTTAAAAAGGATCCACCGGTTGAAAAAACTGAGTCTGAGAAGGAGCTGGAGAAGTTGTGGGAAGAAATGGAAATTCAGCTCAGATTAGGGGAAGTCCATTCTCTGGTTGGCAGTGCATGGAGAACTGAAGCAGGACAACGCAGAGAAATTCCAGGCACCCTTTGTAAGCATAGTTTTTCGCTTGATGAGCAGATCGGGATATATTGCAAACTGTGCCATTTCATTGAAATAGATATCAAAGATATCACACCACCCTTTGTGGAAGAGTGTCATAATTCAGGATCAAGAAAGAGGTTTTCATCTGATAGAATATTTGTCTCACCCTTTGATGAGGATCAGTTTAAAGCATCTGATGTTGGATCAAAGGATGGTTGTACTCATCATCAAGGCACAGTTTGGGATCTAATTCCTGATGTCAAACAAAACCTCTATGCTCATCAGCAAGATGGTTTTGAGTTTATTTGGACAAATTTGGCAGGAACCATGGACCTTGGTAGATTGAAGAGTGCTGATCCTACTAGTGCTGGTGGATGCATCATTTCTCATGCCCCTGGAACTGGAAAGACAAAATTGACTATTGTGTTTCTTCAGGCATATCTGGAAGTATTTCCGGAATGCCACCCTGTCATTATTGCCCCTGCTAGCTTGCTACTTAATTGGGAAGATGAATTCAAAAAGTGGGACATAGGAATTCCTTTCCACAATTTGAACAATCCTGACCTATCAGGAAAAGAACACGTAGCTGCATTGAGAAAACTTGACTGCTTTCCAAATCCAAATAAGAATAAGGAAGCCGTGCGTACGGTGAAGTTGAATTCATGGTTCAAGGACAAGAGTATTCTTGGAATCAGCTACAATTTGTATGAGCAGATTGTGGGGGACTATTCCAATGTTGAGAAGGGAACTCAGAAGAAAAAGAGGAATGAGAAAAAAGAGAAGAGACGTGAAAGTGTGAAACAAAATGCTGTGACAGAAGTGATGGGAAAGATTCTGCATGACATTCCTGATTTATTAGTTCTAGATGAAGGCCACATACCTCGAAATCAACGGAGTCATATTTGGAAGGTTCTCTCAAAAGTTCCAACTCGGAAGCGAATCATCCTTTCGGGGACACCTTTCCAAAACAATTTTCTGGAACTCTATAATACATTATGCTTAGTGAAGCCATCCTTTCCTGACAGGTTACCACATGAACTTAAAAAGTTCTGCCAAAGTAGATTAACAAAAGAAAAGAAAGCGGCGTCTAAAGGTGTGACTTGGGAACCAGTTTCTTCAAGCAACACAACGGGAAAGATCACAGATGAGAAAATATGCCAGTTAAAGTTACTGATGGATCCATTTGTTCATGTTCACAAAGGCAGCATTCTTCAGAAAAATCTTCTGGGTTTGAGAGAGTGCGTGGTGACCTTAATGCCAGACAAAATGCAGAAAGAACTTCTAGAGAGTATTGAATCTTCTCAAAACACATTGAATTTTGAACATAAGTTGGCTTTGGTCTCTGCCCATCCATCCCTCTTACTCAACTGCTGCTCTCTAACTGAAAAAGAAGAATCTGCTGTTGACAGGAGTCGTTTAGAAGGCCTTAAATTGAATCCATCTGTTGGTGTCAAAACCAGATTTCTTGTGGAGTTTGTTCGGCTTTGTGAGGCAGTCAATGAGAAAGTGATTGTGTTCAGCCAGTTCGTTCATCCTCTGTTTTTAATTAGAGATCAACTAAAGTCAGTTTTTAATTGGTCTGAGGGAAAGGAGCTGTTGTGTATGATAGGCAGCCTAGACAAAAAGCAGAAGCAGCTCATGATTCATGGCTTCAATGATGTAAAGAGCCAAGCAAAGATATTGCTTGCGTCAACAAAATCGTGTTCCGAGGGGATTAACTTAGTTGGTGCTTCAAGGGTTGTGCTGCTGGATGTTGTTTGGAACCCCTCGGTGGAGAGGCAAGCGATTAGCCGAGCATATAGGCTTGGCCAGAAGAAAGTTGTGTACACATATCATCTTATGACGCATGGAACCACTGAATATGAAAAGTTTCGCATGCAGGCAAAAAAGAACCAGTTATCTAAACTGGTTTTCTCAAGTACAAGTACTGAAGATGATAGGCCAAAGAGTTCTGATGCAGTTTTTGAAGATGAAGTTCTTGATCAGATGGTTCGGCATCCCAAACTGAAGGACTTGTTTGGTGACTGTGCGGTACAGCCAAAAGACAGAGATTTGATCGAGACTTATGGATCTTGA 3714 0.4216 MAANASVSSRTRKKTASFYRSLLPGHSSSEGGGSSQRQMTGKKRGRGAREKRREPDVVFLGEKVEPDLGARAKAETLSSSSRSNGKKRSKRKINDDFVCLGEFIDERECGEQRRESFVLPPPKEVIDLVESDDMGDDDEENRGSHVSTDKGKSFVNEEHGLRPEKPITIDFGGGCESEGVSEDDDESDSVSYFSSSSDTRDYGESSDEDFIADDIRDDSSSDDYSSSYDDEDEKEKRRIRNNNYEKNKSSGPPRAKKISRFDEGTSSSMDQGRKVETESSAIIKRNGESSASLDDECGGQDQDLWKEADCASVTSGSGEVKGKKSDAKRPERTGENEGADVEASGDSHDHFHVSKPCDDEAEKHKEKQNGWSGRQGVSIHKERRDSTSKIDERMENVKERRENKESRKDREVIGKHKGWVNSKTSYRDWERNVQRNPSRLKEVHLIELLAECFLRKHSTIRDGRSWLQEKDDGHVHWRDTRLPMQTLSSNYNFGVKKDPPVEKTESEKELEKLWEEMEIQLRLGEVHSLVGSAWRTEAGQRREIPGTLCKHSFSLDEQIGIYCKLCHFIEIDIKDITPPFVEECHNSGSRKRFSSDRIFVSPFDEDQFKASDVGSKDGCTHHQGTVWDLIPDVKQNLYAHQQDGFEFIWTNLAGTMDLGRLKSADPTSAGGCIISHAPGTGKTKLTIVFLQAYLEVFPECHPVIIAPASLLLNWEDEFKKWDIGIPFHNLNNPDLSGKEHVAALRKLDCFPNPNKNKEAVRTVKLNSWFKDKSILGISYNLYEQIVGDYSNVEKGTQKKKRNEKKEKRRESVKQNAVTEVMGKILHDIPDLLVLDEGHIPRNQRSHIWKVLSKVPTRKRIILSGTPFQNNFLELYNTLCLVKPSFPDRLPHELKKFCQSRLTKEKKAASKGVTWEPVSSSNTTGKITDEKICQLKLLMDPFVHVHKGSILQKNLLGLRECVVTLMPDKMQKELLESIESSQNTLNFEHKLALVSAHPSLLLNCCSLTEKEESAVDRSRLEGLKLNPSVGVKTRFLVEFVRLCEAVNEKVIVFSQFVHPLFLIRDQLKSVFNWSEGKELLCMIGSLDKKQKQLMIHGFNDVKSQAKILLASTKSCSEGINLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKVVYTYHLMTHGTTEYEKFRMQAKKNQLSKLVFSSTSTEDDRPKSSDAVFEDEVLDQMVRHPKLKDLFGDCAVQPKDRDLIETYGS* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2095 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 830 1187 IPR027417 -
Aev06g2095 1237 Coils Coil 387 407 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 110 410 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 138 165 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 230 269 - -
Aev06g2095 1237 CDD SF2_C_SNF 1028 1160 - -
Aev06g2095 1237 Pfam SNF2-related domain 648 981 IPR000330 GO:0005524|GO:0140658
Aev06g2095 1237 Gene3D - 607 919 IPR038718 -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 377 410 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 321 370 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 1 41 - -
Aev06g2095 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 897 IPR027417 -
Aev06g2095 1237 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 3 1236 IPR044567 GO:0080188
Aev06g2095 1237 MobiDBLite consensus disorder prediction 793 813 - -
Aev06g2095 1237 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 781 884 IPR014001 -
Aev06g2095 1237 SMART ultradead3 633 892 IPR014001 -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 49 70 - -
Aev06g2095 1237 MobiDBLite consensus disorder prediction 1 91 - -
Aev06g2095 1237 SMART helicmild6 1064 1149 IPR001650 -
Aev06g2095 1237 Pfam Helicase conserved C-terminal domain 1038 1149 IPR001650 -
Aev06g2095 1237 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1037 1190 IPR001650 -
Aev06g2095 1237 Gene3D - 957 1226 IPR027417 -
Aev06g2095 1237 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 3 1236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2095 Aev-Chr6 18721051 18725967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2095 1043 1193 RAD5 or RAD16-like Gene Family AT5G05130 36.184 9.55e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev06g2095 SNF2_N 6.2e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2095 K10875 - gmx:100812737 907.516