Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2033 ATGGAGAAGAAGAAAGAAAGAAAGAAAAAGAGAGAGAAAGGGGGGTTACGGGAATGGAAGGGGAAAGAGAGGGAAAAAGAAAGGAAAAAGGGTGGGGAGGTGGGACCCACGTGGTTCTATCTCCCTGGGTGTACCGTGATCTCTTACTCAAACGAACTCAGACTACTCAAGGTATTACAAATAGGTTTTACGTTTAAAAGACGGACAACAAAGATGACGGACAACAAAGTTGTAAGGTATCTTATACTTGCGTGCTCTAGGGAGGGTTATAGGAGGTCTAAGAAAGATACGTTAGAGAAGACAAACCCAACTTCTGTTGCAAGTTGCCAAGCGAGGATCACAATAACTATGGACAAATCTGGCTACCTTGTTATAACGAGAGTTGTGCTTGAACACTCTCATGCGGTTAGCCCGTCTCGCGTGAGATCTCTGAGAGCAAACCGGGTAATAAACATGCATGCTAAACGGATGATTGACATAAATGAGAATGCTGGTGTGCGGACCAATTATCAAAGTCTCGTGCATTCAGCCGACGGAATCCTTAATGGGTTTTCCAGGTACGAAGAAGTTGGGTTCAATGAGAAGGACCTTCTGCTTGACTTCGAAGGCAAATGGATAGATTTAATAGAAAGACACCATTTGGGAGAAAACGATTGGTTGAAAGGTTTGTTTGAGGAACGTCACAAGTGGTTCCCAGCTTTTATGAAGACTCAGTTCTGGGCTGGTATGAGCAGCACGCAGAGGAGTGAGGGGATGCATGCCTTTATGAAGAATTATTTGACACCGAAGAGCAACCTTGAGCAATTTGTCAGGCAATTTGACAATTGTCTTGCATGGAAAGCAAATAAGGAGCGTGAGACCAACAATGGAGATTTCCATACTATTGTGCAATGTGCTACTAATTCGCTTATTGAAAAACAATTCCAGACTGAATACACCCACTCAAAGTTTGCTGAGGTTCAGTCACAGTTTCGGGCAAAGGCTAATTGCTCAACAAGGGAGGTGGGGGTTGACGGCAATATACGTTTTTACGAGGTATCTGAAGAGTTTGAATTAAACGGCGGATGTGTAGATCACGTTTTCAAGGTATCATATGACGTATCGTCGTTTCATGTTTGGTGTGATTGCTTGCTTTTTGAATTCCGGGAGGTTGCATGCAATAGCGTGGAGCTTACAGACACGATTAATCGCGTGTTAGACGAGGCATGGAGTAGGATTGGAGACCAAAGGGGTTGGACCCATGGTACTACTCTAGGGATCAAGTCATGCTTTAAAACTGGAAATGTAGACAGTTGGTTGAACGATATACTGGATGACATGGTCAATAAACATCATCTTGGGCTTGATATCTCAACTTATACACTTCTAATTCATGGGCTTTGTAGAGCAAATAGATGCAAGTGGGCGTACGTTCTGTTTGAGGAAATGATTGATCTAGATATAATGCCTAGATACAGAACATGTCGTTTGCTATTGGATGAAGTAAAACAGAAAGCTATGTATGAAGCTGCTGAGAAAATTGAGGATCTTATGAAGAAAATGTAA 1545 0.4252 MEKKKERKKKREKGGLREWKGKEREKERKKGGEVGPTWFYLPGCTVISYSNELRLLKVLQIGFTFKRRTTKMTDNKVVRYLILACSREGYRRSKKDTLEKTNPTSVASCQARITITMDKSGYLVITRVVLEHSHAVSPSRVRSLRANRVINMHAKRMIDINENAGVRTNYQSLVHSADGILNGFSRYEEVGFNEKDLLLDFEGKWIDLIERHHLGENDWLKGLFEERHKWFPAFMKTQFWAGMSSTQRSEGMHAFMKNYLTPKSNLEQFVRQFDNCLAWKANKERETNNGDFHTIVQCATNSLIEKQFQTEYTHSKFAEVQSQFRAKANCSTREVGVDGNIRFYEVSEEFELNGGCVDHVFKVSYDVSSFHVWCDCLLFEFREVACNSVELTDTINRVLDEAWSRIGDQRGWTHGTTLGIKSCFKTGNVDSWLNDILDDMVNKHHLGLDISTYTLLIHGLCRANRCKWAYVLFEEMIDLDIMPRYRTCRLLLDEVKQKAMYEAAEKIEDLMKKM* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2033 514 PANTHER OS03G0843700 PROTEIN 60 150 - -
Aev06g2033 514 PANTHER OS03G0843700 PROTEIN 200 387 - -
Aev06g2033 514 MobiDBLite consensus disorder prediction 12 28 - -
Aev06g2033 514 Pfam PPR repeat 449 476 IPR002885 -
Aev06g2033 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 483 IPR002885 -
Aev06g2033 514 Pfam FAR1 DNA-binding domain 60 137 IPR004330 -
Aev06g2033 514 TIGRFAM PPR: pentatricopeptide repeat domain 452 481 IPR002885 -
Aev06g2033 514 MobiDBLite consensus disorder prediction 1 28 - -
Aev06g2033 514 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 150 IPR031052 GO:0006355
Aev06g2033 514 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 387 IPR031052 GO:0006355
Aev06g2033 514 Gene3D Tetratricopeptide repeat domain 412 514 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2033 Aev-Chr6 17694456 17696993 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev06g2033 FAR1 2.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2033 - - aprc:113871572 194.126