Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1960 ATGGCCACCTCTTCTGTCACTCCTTTAAACTCTCCCTTTCGCTTTCGCTTCCTCAAACAACCACCGCTCTCCGCCACTCCCTCCAGGTTCAAATTCCAAACTACCAAGCATCTCAGAATCAGCTGTGACTACTCCTATATTGAAGTTAGAGATGTTAGTTATAAGCCACCGGGGACTCAACTCAAGCTTCTGAATTCAGTTAGTTTCTCACTTCCGGAGAAAAGTTTTGGTCTGATTTTCGGGCAGAGTGGAAGCGGAAAAACAACTCTCTTACAGCTTCTTGCAGGAATAAACAAGCCAACCACTGGATCCATTTACACTCAAAAATATGGGAGTGATGGGAATCCTAGTCAACCTCCAGAGCCCTTGTCACCCGAAAGTGTTGGCATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCTGAAAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAATTATCAACTGAGGGAGAATCTCACTGTAGGGCTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATAGCGTTGGATAAAAGTCCACACTCCCTTAGTGGCGGTTACAAACGCCGCCTTGCCTTGGCAATACAATTAGTGCAAATCCCTGATCTACTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGAGCAGATGTTGTGAAGCTTTTAAAGCATCTTAAAAAGGAGCTAACTGTGCTCGTTGTCAGCCACGATTTGAGAGAGTTCTCAGGCCTTGTTGATCGATCATGGAGGATGGAAATGGGTGGCAACCTTAGAGAGGAATTACTACCACTATAG 825 0.4533 MATSSVTPLNSPFRFRFLKQPPLSATPSRFKFQTTKHLRISCDYSYIEVRDVSYKPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGINKPTTGSIYTQKYGSDGNPSQPPEPLSPESVGIVFQFPERYFVAENVLDEVTFGWPRQKGNYQLRENLTVGLQRAINWVGLSGIALDKSPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFSGLVDRSWRMEMGGNLREELLPL* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1960 274 MobiDBLite consensus disorder prediction 105 124 - -
Aev06g1960 274 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 31 270 - -
Aev06g1960 274 SMART AAA_5 73 265 IPR003593 -
Aev06g1960 274 Pfam ABC transporter 64 217 IPR003439 GO:0005524
Aev06g1960 274 PANTHER HEAVY METAL TRANSPORTER 31 270 - -
Aev06g1960 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 264 IPR027417 -
Aev06g1960 274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 274 IPR003439 GO:0005524
Aev06g1960 274 CDD ABC_cobalt_CbiO_domain1 48 264 IPR015856 GO:0005524|GO:0016020|GO:0055085
Aev06g1960 274 Gene3D - 30 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1960 Aev-Chr6 16880952 16886014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1960 47 248 Calmodulin-binding Proteins AT2G36910 26.389 4.43e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1960 - - vun:114196181 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1960 06 16880952 16886014 Aev06g1960 06 16880952 16886014 ECH