Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1954 ATGGATCCCAAGGGCTCAAAGCACCCACCACAACAACACCAACAACATCATCAGCCACAAGAAGCATCATCAAAATTCCTCAGCCTCCCACAACACCAATCAAACATGGGAGAGAACAAACCAGCAGAGGTAAAGGATTTCCAGATTGTGATTGCAGAAAAAGAAGAGAACACCAACAACAACAACAACAAGAAACAGGGGAATCAGCAACTGGCACCAAAGAGGAGCTCAAACAAAGACAGGCACACAAAAGTTGAAGGAAGAGGGAGAAGGATAAGGATGCCAGCACTTTGTGCAGCAAGGATCTTCCAGTTGACCAGGGAATTAGGACACAAATCTGACGGTGAAACAATCCAGTGGCTCCTACAACAAGCAGAGCCATCAATAATAGCAGCAACTGGAACTGGAACTATACCAGCATCAGCTCTAGCTGCTGCTGGAAACTCTGTCTCAACACAGGGGACTTCACTATCCTCTGGATTGCACCCAAAAATTGATGACTTGGGAGGAATTGGAGGGTCCAGTAGTAGTAGTAGTAGTAGTAGGACCAATAGTTGGGCTATGGTTGGAGGCAATTTGGGGAGACCCCATCATCATGTGGCCACAGGTATATGGCCCCATCATGTTAGTGGATTTGGGTTTCATCAGTCATCAACATCTGGTCCATCTACAGCACCACCAAGTTTAGGAGGAACTACTGAGAGCTCAAATTACCTTCAAAAAATTGGTTTCCCTGGATTTGACCTTCCTACTGCCACAAACATTGGGGGTCCTCTGAGTTTCACCTCAATCTTGGGTGGTGCTGGTGGAACCCACCAACAGATTCCTGGACCAGATATAGCTTGGAATTCTTGTTGGGTTTGGCCTTAA 870 0.4644 MDPKGSKHPPQQHQQHHQPQEASSKFLSLPQHQSNMGENKPAEVKDFQIVIAEKEENTNNNNNKKQGNQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSTQGTSLSSGLHPKIDDLGGIGGSSSSSSSSRTNSWAMVGGNLGRPHHHVATGIWPHHVSGFGFHQSSTSGPSTAPPSLGGTTESSNYLQKIGFPGFDLPTATNIGGPLSFTSILGGAGGTHQQIPGPDIAWNSCWVWP* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1954 289 MobiDBLite consensus disorder prediction 12 38 - -
Aev06g1954 289 Pfam TCP family transcription factor 77 172 IPR017887 -
Aev06g1954 289 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Aev06g1954 289 MobiDBLite consensus disorder prediction 1 90 - -
Aev06g1954 289 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 21 279 - -
Aev06g1954 289 MobiDBLite consensus disorder prediction 53 74 - -
Aev06g1954 289 MobiDBLite consensus disorder prediction 75 90 - -
Aev06g1954 289 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 279 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1954 Aev-Chr6 16796065 16797533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1954 43 280 TCP Transcription Factor Family AT3G27010 55.649 4.31e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev06g1954 TCP 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1954 - - pvy:116145554 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1954 06 16796065 16797533 Aev06g1954 06 16796065 16797533 ECH