Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1860 ATGAGTGCACACAAAGTGTCACCACTTGATGTCATCTCAAGCCAAAAAGAGTCTTGGAAGATTGCAGTCCGCATTGTGCGCATGTGGCGTGTATGCTATCCTTCATCACCAAATGTTATATCCAGCATTCAAATGCTATTGGTGGATGAAAAGACAATCAAAGCTTCAATCGCCACAGAAAAACTAATCAGCAAGTATCAACCAATGCTTGATGAGGGTAAATGCTACATATTTCAGAAATTTGTGGTGGAAGATAACATAGGTCAGTATAGAGCTTCAAAACACAAATATAAAATTTGTTTCCATGTTGGGACTGCTGTAACCCCTACAAATGGTAATCTCCCACTGTTTTCATTCACATTTGTTCCCTTCGACAATATCCTACAAGGGAACATCGCTGCTGGGTATCTAATTGATGTCATTGGAGAAATATCAACATATGAGACATCAACAGTGTTCCAAAGAAATGGAATCACCACAAAGCTGAAGAAGATATACTTAACAGATTTGAGCAATATACGAATCAAATGCACTTTATTTGGAGAGCATGTCGACTATGCTGAAAAATTAATTGAACAACACTGCAATAATCAAATGATTGTTGTTCTTCAATTAGTCATGATTTCATCATCTGCAGGTGAGATCAAAGTCTCCACAGCTTGGAATGCATCCAAATTTATGATCAACCATAACATTCCTGAAGCTGAGCTCTTCTACAAGAAGTTGGCAACAACACAAGAGTACTCATTGGCCACATGTTCTCAAGCACAATCCTTGACACAATCTGCTACTTCAACTGATTTCACTGATATAGACACATGGAAATCATTAGCAGAATTGAAAGCTATAACCAATGTTGGGATATATACAACTAGTGCTACAATTCAGAAGCTACTTACTCAACATGACTGGTGCTTTGATGCTTGTGCATCACACGGAAACAAGATCAAAATCTTTAATGGAACAGATGCATCTATCATTCTATTTGATAACATTGCTTTCAAGATTATTGGAAAATCTGCCAATGATTTAAAAAACCAACTCATTAAGGAAGGTGACCAAGATGGAATCCTAGATGAGCTAGATTCCTTTATGGGCAAACAATATATCATGAAACTTGAGGTGACCCAATTCAACCTCAACAATAGAGCTGCTGGATACACAGTCAAAAAACTATCTAATGATTCATCCCTCATAAGTCAATTCTTGGATAAATATTCTCCATCATTGGTCTCAAACAATGAGGGTGCAATATCTTCAGCTGATAAATCACAGTCTGAGGAACTCTCTCCATTAAACATGGTCTATCCAACACCACTGCTAGGAAATTCTGATTCTTTCAGTGATTTCTCTGAAAACTCACTGCAACAGCCTCCTAAACTACAACCACCTCCTAACAACAATGATGAATTCCAATTCTCCTCACAATCTGGAACACGACTGCCACCAAATAGACTGCTTTACAATATTATCCCAACCAAACTGAACTTCAGTGTAAGGACACTGACATTGAAAAAACTACTAGCCAATGCACCCAGTCTTCAGTCACTCCCTCCAAGAGGAGCAGCTCTGTAG 1575 0.3822 MSAHKVSPLDVISSQKESWKIAVRIVRMWRVCYPSSPNVISSIQMLLVDEKTIKASIATEKLISKYQPMLDEGKCYIFQKFVVEDNIGQYRASKHKYKICFHVGTAVTPTNGNLPLFSFTFVPFDNILQGNIAAGYLIDVIGEISTYETSTVFQRNGITTKLKKIYLTDLSNIRIKCTLFGEHVDYAEKLIEQHCNNQMIVVLQLVMISSSAGEIKVSTAWNASKFMINHNIPEAELFYKKLATTQEYSLATCSQAQSLTQSATSTDFTDIDTWKSLAELKAITNVGIYTTSATIQKLLTQHDWCFDACASHGNKIKIFNGTDASIILFDNIAFKIIGKSANDLKNQLIKEGDQDGILDELDSFMGKQYIMKLEVTQFNLNNRAAGYTVKKLSNDSSLISQFLDKYSPSLVSNNEGAISSADKSQSEELSPLNMVYPTPLLGNSDSFSDFSENSLQQPPKLQPPPNNNDEFQFSSQSGTRLPPNRLLYNIIPTKLNFSVRTLTLKKLLANAPSLQSLPPRGAAL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1860 524 PANTHER BNAC07G49340D PROTEIN 324 419 - -
Aev06g1860 524 PANTHER BNAC07G49340D PROTEIN 35 263 - -
Aev06g1860 524 SUPERFAMILY Nucleic acid-binding proteins 119 242 IPR012340 -
Aev06g1860 524 Gene3D - 113 250 IPR012340 -
Aev06g1860 524 CDD RPA1_DBD_B_like 139 240 - -
Aev06g1860 524 Gene3D - 3 109 IPR012340 -
Aev06g1860 524 Gene3D - 315 403 IPR012340 -
Aev06g1860 524 SUPERFAMILY Nucleic acid-binding proteins 7 109 IPR012340 -
Aev06g1860 524 MobiDBLite consensus disorder prediction 447 479 - -
Aev06g1860 524 Pfam Domain of unknown function DUF223 45 134 IPR003871 -
Aev06g1860 524 CDD RPA1_DBD_A_like 20 107 - -
Aev06g1860 524 SUPERFAMILY Nucleic acid-binding proteins 275 393 IPR012340 -
Aev06g1860 524 PANTHER REPLICATION FACTOR A 1, RFA1 324 419 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev06g1860 524 PANTHER REPLICATION FACTOR A 1, RFA1 35 263 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1860 Aev-Chr6 15264037 15266742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1860 5 249 Core DNA Replication Machinery Family AT2G06510 21.429 6.37e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1860 - - adu:107477146 157.532