Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1842 ATGATCAATTCACTGTGTGGAAGTTCAGTGTCACTCATCAAGAGTGAGAATTCAAGCAACAAACACCAACAACAAAACCCAACATCTTTAAATAATGACTCATCAATTTTGCAAAATCACTTTAAGAAGAACAATAATGCAACTCAATCCTGTGGTGATGATGATTTAGATCAAACTAGCCTAACCCCACCAAGCTTAAACCTCCCTACACTAAAGTTCGACCTTGAAGGAGATGTAGAAGTGCAATCACCAGATAGTTCCATGTGGGAATCATTCTTCTCTGATCATCTAGATGGTGATTTCATGATCTCTTCACCAGTGAGAATCACCAATAATAATAATAATAATAATGTCCATTCACCACTTCATGCTTCAACCTACAACTATGCTCATGCAATGCAAGAACAGAGCCACTCTGTTTGTTCTTCATCACCACCAAGATTCTCATCACAATTTGGAGCATATAACAGTAGTAGTAGTAAAGGAAAAGGGCTAAGCCCACTTCATAGGGTCTTTAATTTTAATTCCCCAAATAATCAGTATTATATGGATCATGTGGAGAATCTTTCATCACTGCCAGCAATTGAGGAGTTCCTGGAAGATTACAGAGTGGTTTCTTCTTCTTCAACAGATCATCATCAGTGCTTCGACTTGCCGGCAGCGCCGCCGTCTTCGATCATGGAGACGGTGGCGATGCCTAATTCTAATAACAATTCATCATCAGTGCATGATGGCGGTTCTTCTTCTTCTCATAAACCGTCACAAGAGAGCGATATATACCATGAGATGGGGTGTATGGTTAGTGCGTCACTTTCACAAGCTCTGCAGCAAGAAAGGTTTCAGGAGAAGCAGCAACAACAACAGGGTTTGATGGTGCCTATGCCAATTGGGATAGAGCAGGAGCAAGACAGTGGGCTCCAACTAGTGCACCTGCTTCTAGCATGTGCAGAGGCAGTAGCCAAAGAAGAATACATGCTCGCAAGAAGGTACCTACACCATCTCAACAGGGTAGTAACCCCACTCGGTGACTCAATGCAACGCGTTGCGTCATGCTTCACTGAATCCCTCAGCACAAGGCTAGCTTCAACCCTCACCACCACAAACCCATCATCATCAACCACCACCACCACCAAGCCTTCTCCGTCACTCTCTGGATTCCCATCATCAAACTCACTAGAAGTCCTTAAGATCTATCAGATCGTCTACCAAGCCTGTCCGTACATAAAATTCGCCCACTTCACAGCCAATCAGGCCATCTTTGAGGCCTTTGAGGGCGAAGAGCGGGTCCACGTGATAGATCTGGACATTCTCCAGGGCTACCAGTGGCCCGCCTTCATGCAGGCCCTTGCAGCCCGACCCGGGGGAACTCCCTTCCTTCGGATAACTGGTGTTGGGGCCTGCATAGAATCGGTCAGGGAAACAGGCCGGTGCCTGACCGAATTAGCCCACTCCCTCCGCATCCCCTTTGAATTCCACCCAGTAGGGGAACAGCTGGAAGACCTAAAGCCGCACATGTTCAACCGCCGAGTCGGCGAAGCATTGGCCGTTAATTCAGTTAACAGGCTCCACCGCGTCCCTGGTAATTCCCTCGGTAATCTGTTGTCGATGATTAGGGACCAAGCTCCAAGCATAGTGACACTAGTTGAGCAGGAAGCCAGCCACAACGGGCCTTATTTCCTCGGGAGGTTCCTTGAGGCGCTGCACTATTACTCGGCGATTTTCGATTCCTTGGACGCCACGTTTCCGCCGGAATCCGCGCAGAGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATAAGGAACATCGTGGCGTGCGAGGGAATGGAGAGGATAGAGAGGCACGAGAGGCTTGAGAAGTGGAGGAAGATCATGGAAGGGAAAGGATTCAAAGGGGTGCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGCTTGGGTTGTACTCTGTTGATGGGTACAGATTGACGGAGGATAAAGGTTGCTTGTTGCTTGGGTGGCAAGATAGAGCACTCGTTGCTGCTTCTGCTTGGAGGTGTTGA 2046 0.4809 MINSLCGSSVSLIKSENSSNKHQQQNPTSLNNDSSILQNHFKKNNNATQSCGDDDLDQTSLTPPSLNLPTLKFDLEGDVEVQSPDSSMWESFFSDHLDGDFMISSPVRITNNNNNNNVHSPLHASTYNYAHAMQEQSHSVCSSSPPRFSSQFGAYNSSSSKGKGLSPLHRVFNFNSPNNQYYMDHVENLSSLPAIEEFLEDYRVVSSSSTDHHQCFDLPAAPPSSIMETVAMPNSNNNSSSVHDGGSSSSHKPSQESDIYHEMGCMVSASLSQALQQERFQEKQQQQQGLMVPMPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTESLSTRLASTLTTTNPSSSTTTTTKPSPSLSGFPSSNSLEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEGEERVHVIDLDILQGYQWPAFMQALAARPGGTPFLRITGVGACIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPGNSLGNLLSMIRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGMERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSVDGYRLTEDKGCLLLGWQDRALVAASAWRC* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1842 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 679 IPR005202 -
Aev06g1842 681 MobiDBLite consensus disorder prediction 363 385 - -
Aev06g1842 681 MobiDBLite consensus disorder prediction 14 35 - -
Aev06g1842 681 PANTHER GRAS FAMILY PROTEIN RAM1 19 679 - -
Aev06g1842 681 MobiDBLite consensus disorder prediction 227 256 - -
Aev06g1842 681 ProSiteProfiles GRAS family profile. 299 680 IPR005202 -
Aev06g1842 681 MobiDBLite consensus disorder prediction 228 254 - -
Aev06g1842 681 Pfam GRAS domain family 308 680 IPR005202 -
Aev06g1842 681 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1842 Aev-Chr6 14956239 14961184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1842 302 681 GRAS Transcription Factor Family AT1G66350 44.819 1.17e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev06g1842 GRAS 1.2e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1842 - - gmx:100805039 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1842 06 14956239 14961184 Aev02g1987 02 21649214 21651517 PCT