Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1820 ATGGATAGGAGGTTGACATGTTTTGGTACCGTGAGCCTTCCAGTGGGATACACATTCTGCCCTACCGATGAGATTTTTGTGGCTTACTACCTCAAGAACAAGGCACTTTCTCCTACGAGGATTGATGTTGAGGTTGTTCCCGAGTATGATGTCTTCAGCACACAGCCTAGTAGCCTACCATCAGGTGGGAGTGTTTTTCTGGGGAACAAGTTCTTCTTCCTTAATCTGAGGGAACGTGTGATTGAGGAGAATGAGAAGAGGCCAGCTGGGTTAGGGGAGTGGAGAAGTGCAGGTGAAGTTAAGGACATCTATGTTTCTAGCAAAAATAAGCTTGTTGGGAAGAGGAACAAACTTCAGTACTGGAGGAGGAAGGGCCTTAAGTTCATCAGAACTAGGTGGATTATGCACGAGTATCGCCTCTATCTCCCTGGTCATCTTCCTCACCCTTCACAGATGTCACCCTGGGCTGGCTACAAAATATTTTTGAAGAATGAGACGCCGAGCAAGAGGGCAAGAAATGCTTCCGATACCGAGAACTCCGACAGCGACGGCATCAGATCGGACGAGGAGGAAGAGGAGGAGGAGGAAAATGAGATGATTATAGAGTTGAAGAACAATGAGGCACCCGTTGAAGTGAATTTGGATGGAGAGAGTGCAAGAAACATAACCCCTCCTCCCTCACCAGGTTCCTCTGACTCTGATGACTCACTTACATCAACCAAGTGA 726 0.4752 MDRRLTCFGTVSLPVGYTFCPTDEIFVAYYLKNKALSPTRIDVEVVPEYDVFSTQPSSLPSGGSVFLGNKFFFLNLRERVIEENEKRPAGLGEWRSAGEVKDIYVSSKNKLVGKRNKLQYWRRKGLKFIRTRWIMHEYRLYLPGHLPHPSQMSPWAGYKIFLKNETPSKRARNASDTENSDSDGIRSDEEEEEEEENEMIIELKNNEAPVEVNLDGESARNITPPPSPGSSDSDDSLTSTK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1820 241 Coils Coil 186 206 - -
Aev06g1820 241 MobiDBLite consensus disorder prediction 183 200 - -
Aev06g1820 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 171 - -
Aev06g1820 241 MobiDBLite consensus disorder prediction 223 241 - -
Aev06g1820 241 MobiDBLite consensus disorder prediction 168 241 - -
Aev06g1820 241 MobiDBLite consensus disorder prediction 168 182 - -
Aev06g1820 241 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Aev06g1820 241 Gene3D NAC domain 22 167 IPR036093 GO:0003677|GO:0006355
Aev06g1820 241 SUPERFAMILY NAC domain 6 163 IPR036093 GO:0003677|GO:0006355
Aev06g1820 241 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 171 - -
Aev06g1820 241 ProSiteProfiles NAC domain profile. 13 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1820 Aev-Chr6 14684530 14686907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1820 9 200 NAC Transcription Factor Family AT5G13180 33.503 2.21e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g1820 NAM 1.1e-16 No_clan