Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1816 ATGGCAGATCCTGCAGCCATATACGATTTTCTGAGCCAAGCTTCCTCTGATTCAAGAACAGTTGCAAAAAGAGCAACACAATCACAACCACAACCACAACCCCATCATCATCACCTTCACCATCATAACCATCACCAACAACCACCATCTTCAACAAGAACCTTTCAATGCCATTTCTGCAACCGCAAATTCTACACTTCCCAAGCACTCGGTGGCCATCAAAATGCACACAAGCTAGAGAGAGCAGCTGCTAGAAGAACCACCACTGTTCCTAATTTCCAACACAGTAATGGAAACAACAATACCCACTTAATTCCAACACCACAAACACAAACACCAAATAATAATACACTTTCACCATTGGAGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTATTCTCAAGAACAATATCATCACTGACCCCACAAAATCCATGATGATGATGGCCACCATGGCCATGCCTACTCATCATCATGAACTTCTTGAATCTGCTGCTGTTCCTTCTCATGGACGTTTCTTTGGCCACCCTTATTGGCTTGAAATGGACCCATCAACATTGCAGATTCAGAATACCCATCACCATCATCAACTTCACCATGTTAATCCTTTGGCCTTCCATGCTGCTGTTGCTGGTGGTTCTTCAACTTCTCAACATGTTCTGTCTCATAATGCTAATGCTGCTGCTGCTTCTGATGCTTCTGAACATGTCAACCTCGACCTTACACTTCGCCTGTGA 744 0.4449 MADPAAIYDFLSQASSDSRTVAKRATQSQPQPQPHHHHLHHHNHHQQPPSSTRTFQCHFCNRKFYTSQALGGHQNAHKLERAAARRTTTVPNFQHSNGNNNTHLIPTPQTQTPNNNTLSPLESPPPPPPPPPSSILKNNIITDPTKSMMMMATMAMPTHHHELLESAAVPSHGRFFGHPYWLEMDPSTLQIQNTHHHHQLHHVNPLAFHAAVAGGSSTSQHVLSHNANAAAASDASEHVNLDLTLRL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1816 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Aev06g1816 247 MobiDBLite consensus disorder prediction 13 54 - -
Aev06g1816 247 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Aev06g1816 247 MobiDBLite consensus disorder prediction 13 33 - -
Aev06g1816 247 MobiDBLite consensus disorder prediction 91 118 - -
Aev06g1816 247 MobiDBLite consensus disorder prediction 91 135 - -
Aev06g1816 247 PANTHER ZINC FINGER PROTEIN JAGGED 41 247 IPR045320 GO:0003700
Aev06g1816 247 Gene3D Classic Zinc Finger 33 105 - -
Aev06g1816 247 MobiDBLite consensus disorder prediction 119 135 - -
Aev06g1816 247 PANTHER ZINC FINGER PROTEIN KNUCKLES 41 247 - -
Aev06g1816 247 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1816 Aev-Chr6 14617983 14618726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1816 49 108 C2H2 Transcription Factor Family AT5G14010 62.295 1.28e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1816 - - ahf:112759108 160.614