Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1798 ATGCTGCTGCTGCCGTGCGACTACTGCGACTCCAAAACGGCAGTGCTGTTCTGCCGAGCGGACTCGGCAAAGCTGTGCCTGTCATGTGACCAGCACGTGCACTCCGCCAATGCCCTCTCCCTCAAGCACGTGCGCTCCCAGATTTGCGACAACTGCAGGAACGAGCCCGCCACCGTGCGCTGCTCCACCGACAACCTCGTTCTCTGCAACGACTGCGACTCCGACGCACACAACGCCTCCTCCGTTGCCTCCTCCCTCCACGATCGCCGCCGCATCGAGGGATTCTCCGGCTGCCCCTCCGCCCTCGAGATCGCGGCGGCGCTAGGCATCGACCTGAAGTCCGACAACGATAACTGCCATGTCCGGTCTGGTCATCTGGATTTCGAGGAGTTTAAGGGTCCCGTGGTCCCAATTGTGCGGTCTTGTGTCTCTTCGAGCAAAGGTCAGGGGGTATTGAAGGATGAGGTGTATGAGCAGGTGGTGGAAATGGCCAGGAGGAAGAGATTAGCGGCGGCGGTGGCGGCTCAAGATGGAGGAGGTGAAGATGAATTGTGTCCTGTTACGCCGCCGTGTGTGCAGGGTGCTGTGGAGAGCGTTGAATTCAATAGTAACAACTATAACAACAACGACAACAATAACAACAACATCAACAACAAAAACCGCAACAACAACAACAACGGTGGGAATAATGATGCTGAGTTGTTGATGCAGCAAACGCCGTTCACGTCATTGCTAATGATACCACCAGATGGTGGTGATGTTAGGAGAAACGATTACGGAAGTGAAGGAGATCTTCTTTGGACTTGTAATCCCGCGTATCAGCCTCCTCAGGTATGGGATTTTCAGTTACAGAAATCAAGAGATTGCAGTGAACCAAGGATGTTGGCATTTGATAGGTTAGAAGAAGCTTCTATAGTGATTCCAAAAGCGTTGCAAGATGTGCACAATATGAACTCCACAATGATTGATGATATTCTATCAAGAAATAACCAATCGGATCAGTCATCATCAAACCATGTGATCAAAAGAGAAGAAAGCAACAGGAAAGGTAGAGGGGGATTATCATCGGAGTCCAAGTTTATCGAGTCCATAACGCAGAGTAGCGCCAACAATGCAACATACATGGAGCATCTTGTGAGTGGGAGCGAAAATGTTAGCACCATAAAAGACAAGGTTAGCTCGGAAGAGCTAGCGAAAAATCGAGGTGATGCCATGCTTCGCTACAAGGAAAAGAAGAAAACTCGGAGGTACGATAAGCACATTCGCTATGAATCAAGAAAGGTGAGGGCTGATACGAGACAGAGGGTGAAAGGACGATTCGTGAAAGCAAGTGATACATCAGATGTTCAAAATCAAACATGA 1362 0.4993 MLLLPCDYCDSKTAVLFCRADSAKLCLSCDQHVHSANALSLKHVRSQICDNCRNEPATVRCSTDNLVLCNDCDSDAHNASSVASSLHDRRRIEGFSGCPSALEIAAALGIDLKSDNDNCHVRSGHLDFEEFKGPVVPIVRSCVSSSKGQGVLKDEVYEQVVEMARRKRLAAAVAAQDGGGEDELCPVTPPCVQGAVESVEFNSNNYNNNDNNNNNINNKNRNNNNNGGNNDAELLMQQTPFTSLLMIPPDGGDVRRNDYGSEGDLLWTCNPAYQPPQVWDFQLQKSRDCSEPRMLAFDRLEEASIVIPKALQDVHNMNSTMIDDILSRNNQSDQSSSNHVIKREESNRKGRGGLSSESKFIESITQSSANNATYMEHLVSGSENVSTIKDKVSSEELAKNRGDAMLRYKEKKKTRRYDKHIRYESRKVRADTRQRVKGRFVKASDTSDVQNQT* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1798 453 Pfam CCT motif 401 443 IPR010402 GO:0005515
Aev06g1798 453 MobiDBLite consensus disorder prediction 338 352 - -
Aev06g1798 453 CDD Bbox1_BBX-like 48 92 - -
Aev06g1798 453 Pfam B-box zinc finger 46 85 IPR000315 GO:0008270
Aev06g1798 453 ProSiteProfiles CCT domain profile. 401 443 IPR010402 GO:0005515
Aev06g1798 453 MobiDBLite consensus disorder prediction 203 230 - -
Aev06g1798 453 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 450 - -
Aev06g1798 453 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-LIKE 4 450 - -
Aev06g1798 453 ProSiteProfiles Zinc finger B-box type profile. 6 48 IPR000315 GO:0008270
Aev06g1798 453 SMART bboxneu5 1 48 IPR000315 GO:0008270
Aev06g1798 453 SMART bboxneu5 49 92 IPR000315 GO:0008270
Aev06g1798 453 MobiDBLite consensus disorder prediction 328 357 - -
Aev06g1798 453 CDD Bbox1_BBX-like 5 48 - -
Aev06g1798 453 ProSiteProfiles Zinc finger B-box type profile. 44 92 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1798 Aev-Chr6 14401683 14409043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1798 3 445 C2C2-CO-like Transcription Factor Family AT2G33500 37.234 7.58e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aev06g1798 CCT 2.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1798 - - ahf:112697135 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1798 06 14401683 14409043 Aev06g1798 06 14401683 14409043 ECH