Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1785 ATGCAATTAAAGCATAAGTTAGGAGGCATCAAGAAATCAGGTCTTATAAACAGCTATCTTCTAGAAATAAAACAAACGATAGATTCTTTGATATCAGTTGGAGCAAATTTCTCTGAATCAGATCATATTGAAGCGATCTTGAATGGTCTCACGGAAGAGTATGGTCCTTTCATTACAATTATACTTGCTCGTCCTAATCCGATCTCAGTAGGGGAGCTAGAGGCGTTACTAATGGCACAAGAAGAAATGTTGGAGCGTTTCAGGAGAAACACCTCGTTTATTCAAGCAAATCTTGCACATAATTCAAGTTCTCAGCCGTTTAATGGTGCAGGAAGAGGATACTCGAATGGAAGTATCAGCGATTTATATAGCTCGATGACCGCGAGAGCAAAACCTCTGAGCTTATGGCTCGAAGTGGGACCTGGACCGTTCAACATCCCGAATCTCCGCGTCGGAACCCTAGACTCTCTGCTTTCTCTCAGCGATGATCTCGCCAAGGCTAACAATTTCATGGAAGGAGTGTCACACAAGATCCGGCGCCAGATTGAGGAACTGGAGAGGGTTTCAGGTGTCGAGAGCGGCAGCCTCACCGTTGATGGAGTTCCTGTTGATTCCTACTTGACCAGATTTGTTTGGGATGAAGCTAAGTACCCTACTATGTCGCCGTTGAAGGAGATCGTGGATGGAATTCATGGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTATAACAATATCCGTGGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCTGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGATATCATAACTTCGGAACATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTATGAAACATTGACAAACTATGTGGTCCCCAGATCTTCAAAGAAGCTGTATGAGGATAATGAATATGCTCTTTATACCGTAACACTCTTCAATCGTGTTGCGGATAATTTTAGAGTTAGTGCACGTGAAAAAGGTTTCCAGATTCGTGATTTCGAATACAGTCCAGAAACACATGAGGGTAGAAAGCAAGAGTTAGATAAATTAATGCGAGATCAGGAAAGCTTGAGAGGTTCTCTATTGCAGTGGTGCTATACCAGTTATGGAGAGGTTTTTAGCTCCTGGATGCACTTCTGTGCTGTACGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTTTTAGCCCCATCTTCAAAAGCTGAAAAGAAAGTACGTTCCATCCTTGAGGGGTTGAGTGATAGCACAAACAGGCAAGTAACTTATGATGTCTATTGCTTTCTGGTTAAAATTGCTGGGTTTTAG 1395 0.4265 MQLKHKLGGIKKSGLINSYLLEIKQTIDSLISVGANFSESDHIEAILNGLTEEYGPFITIILARPNPISVGELEALLMAQEEMLERFRRNTSFIQANLAHNSSSQPFNGAGRGYSNGSISDLYSSMTARAKPLSLWLEVGPGPFNIPNLRVGTLDSLLSLSDDLAKANNFMEGVSHKIRRQIEELERVSGVESGSLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRGQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAIVSKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRVSAREKGFQIRDFEYSPETHEGRKQELDKLMRDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSSKAEKKVRSILEGLSDSTNRQVTYDVYCFLVKIAGF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1785 464 Gene3D - 268 356 - -
Aev06g1785 464 SUPERFAMILY Vacuolar ATP synthase subunit C 142 450 IPR036132 GO:0015078|GO:0033180|GO:1902600
Aev06g1785 464 Gene3D - 146 417 - -
Aev06g1785 464 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 144 448 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aev06g1785 464 CDD V-ATPase_C 142 442 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aev06g1785 464 Pfam gag-polypeptide of LTR copia-type 11 83 - -
Aev06g1785 464 Coils Coil 70 90 - -
Aev06g1785 464 Pfam V-ATPase subunit C 143 442 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aev06g1785 464 Gene3D Vacuolar atp synthase subunit c; domain 1 143 439 - -
Aev06g1785 464 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 144 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1785 Aev-Chr6 14272998 14283123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1785 144 447 Primary Pumps ATPases(2) AT1G12840 84.539 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1785 K02148 - gmx:100813963 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1785 06 14272998 14283123 Aev06g1785 06 14272998 14283123 ECH