Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1784 ATGATGATGGATCAGGATGAGGATGAGGGGCAAGGAGGGAAGTTGGTTCTTCAGAAAAACGAGGCCTGTGAGTTTGTGGCAGGTGTTGGGGCTGAGCTTCCCTCTGTCACCGAGCCAGGGGACAAGAACAACATAAGGAAAAGTCACGGGTCGGGTCGGATCCACAACAACGTTAACGATGAGCATAATCTTGGTGGTGGTTTTGTTGTTCCAACGCTGTTTGGGAATGTTCATAGGAAGAGGAGAATGGCTAGGATGAGGAGAAGGTCCTCTACCACCGTGATGCACAGGATCAACCCTCCTCCTCTCCCTTCATCAACAACAACTACAACTGCTGCTGTTCCTTCTTCCAGCTCCTCGCACGTGCCAATCACCACTGCTCTTCCTTCTCATGAACCCGCCACTACTACTCTCCACCCCGCACGTGTAATTGATCATGGAAGGTTGAAATTCCTATTTCAAAAGGAGCTAAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGGTATTGCCAAAGAAAGCAGCAGAGGCTTATCTTCCTGCTCTTGAATCAAAGGAAGGAATTCTTATAAGCATGGATGATCTAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAATAACAATAGTCGGATGTATGTACTTGAGAACACCGGAGAATTTGTCAACACACACGGCCTTCGCTTTGGAGATTCCATTATGGTTTACCAAGACAAACAAAACCATAATTATGTAATTCAGGCGAAAAAGGCCTCTGATCAAGATGAATTTAGGGAAGAAACCACTACTAGCGATATCAGCAACGATATCTTCCTCAATGATTATGAGGTTAGCAAACCCAATTGCTTCAACTCCACCTTCCCTGCTGTGAATGATACAGGAATGTCATTCATATATGAGACTACTTTCTCAAATGACTCCCCACTTGATTTTTTGGGTGGATCAATGACAAACTTTTCAAGGATTGGACCAGTTGAGACTTTTGGATCTGTTGAGAATTTGTCACTTGATGACTTCTATTAA 1032 0.4419 MMMDQDEDEGQGGKLVLQKNEACEFVAGVGAELPSVTEPGDKNNIRKSHGSGRIHNNVNDEHNLGGGFVVPTLFGNVHRKRRMARMRRRSSTTVMHRINPPPLPSSTTTTTAAVPSSSSSHVPITTALPSHEPATTTLHPARVIDHGRLKFLFQKELKNSDVSSLRRMVLPKKAAEAYLPALESKEGILISMDDLDGLHVWSFKYRFWPNNNSRMYVLENTGEFVNTHGLRFGDSIMVYQDKQNHNYVIQAKKASDQDEFREETTTSDISNDIFLNDYEVSKPNCFNSTFPAVNDTGMSFIYETTFSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDFY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1784 343 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 77 343 IPR044800 GO:0003700
Aev06g1784 343 Pfam B3 DNA binding domain 153 250 IPR003340 GO:0003677
Aev06g1784 343 Gene3D - 149 269 IPR015300 -
Aev06g1784 343 SUPERFAMILY DNA-binding pseudobarrel domain 151 250 IPR015300 -
Aev06g1784 343 MobiDBLite consensus disorder prediction 80 124 - -
Aev06g1784 343 CDD B3_DNA 151 253 IPR003340 GO:0003677
Aev06g1784 343 MobiDBLite consensus disorder prediction 93 124 - -
Aev06g1784 343 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 77 343 - -
Aev06g1784 343 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Aev06g1784 343 SMART B3_2 153 255 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1784 Aev-Chr6 14258445 14262747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1784 50 343 B3 DNA Binding Superfamily AT3G26790 48.773 1.31e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev06g1784 B3 8.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1784 - - gmx:100783961 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1784 06 14258445 14262747 Aev06g1784 06 14258445 14262747 ECH