Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1764 ATGGAGAGAGACGCAAATCCGCTACAGCCACCAAGGCCTCACCCTCACACCACCGCCGTTTCATGGACGGAACCACCACTGCTCGAAAACACTGACATTGGCATTTCCATGAATGCCCCTCTCAGTTCCTTCAAATCCATGCTCCAACCTCACTGCTACGTCAACACCAACACTTCCAACACTATCACCTTTGTTCCGAACCCATCATCATCAACAACAGATAACGCCTTTCTCACACAAAACAATAACACCAACAGCAGCAACAACATGGACTCCTTCACTCTCGAAAACCCTTTCTCTCCGCTTAAACCCTCTTTCTTTAGCAACCCTTTTGATGGCGGTTTCGATGTGGGCTCCGAGAGTGGGTTCTTCCTAGGGAACCACTCTTCCAATTCCCCTGTTTTGATGGGTCCCACTCAGCCGATGATGAGCTCTCTAGAGCTCAGTTCCGGCTCCGAGTTCCCTCCGGCGACTCGGATTATGCCGGCGGCGGCCGATGATGCCGTCGGGCTCCACGCCTTCGCTGCTGCGGGGCTTGAAATGGAAGCCTTTGGTGGCTCTGAAAATGCTCTGTTTTTGAACAGGGGAAAGGCTCTGAGGCCTCTTGAGGTTCTCCCTTCGGTGGGGGCGCCGCCGACTCTATTCCAGAAGCGTGCTGCGCTTCGCCGTGGCTCCGGCGGGGCTGAGAATTTTGGGGGATTGGAGGATTTGGAGAGGAAATGGGGAGTGGGGGAAGTTGAGGAAGGTAGTGCTTCGGGGTTGAATTATGATTCTGATGAGGATAATGGTGAGAATGGTAGGTTAGTTTTGGAGGAGGGTGGGAATAATGGGGTAGGGAATGGGAGTTTGAGCGTGGGTGGCTCTGTCAATGGTGGGGACCAGAGGGGGAAGAAGAAGGGAATGCCAGCGAAGAATCTCATGGCCGAGAGGCGCCGCCGCAAGAAACTCAATGACAGGTTGTACATGCTTAGGTCTGTGGTGCCTAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATTGACTACTTGAAGGAGCTACTGCAGCGGATTAATGATCTTCACAATGAACTGGAGTCAACTCCGACTGGCTCAGTGTCGCAACCTTCTACAAGCTTTCAGCCTTTGACACCCACTCCGCAAACCCTTCCCAGCCGGGTGAAGGAGGAACTATATCCTGGCAACTTGCCAAGCCCCAAAAACCAACCTGCAAAGGTGGAGGTTAAGGTAAGGGAAGGGAGGGCTGTCAACATTCATATGTTTTGTACTCGCCGACAAGGTCTTCTGCTTTCTACCATGAGGGCTTTGGACAACCTCGGATTAGACGTTCAGCAGGCTGTTATTAGCTGTTTCAATGGCTTTGCTCTAGATGTCTTCAGAGCTGAGCAATGCATAGAAGGTCAGGATGTTCCGCCGGAGCAAATCAAAGCAGTTCTGCTGGATTCAGCTGGGTTCCATGGTACGATGTGA 1476 0.521 MERDANPLQPPRPHPHTTAVSWTEPPLLENTDIGISMNAPLSSFKSMLQPHCYVNTNTSNTITFVPNPSSSTTDNAFLTQNNNTNSSNNMDSFTLENPFSPLKPSFFSNPFDGGFDVGSESGFFLGNHSSNSPVLMGPTQPMMSSLELSSGSEFPPATRIMPAAADDAVGLHAFAAAGLEMEAFGGSENALFLNRGKALRPLEVLPSVGAPPTLFQKRAALRRGSGGAENFGGLEDLERKWGVGEVEEGSASGLNYDSDEDNGENGRLVLEEGGNNGVGNGSLSVGGSVNGGDQRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSVSQPSTSFQPLTPTPQTLPSRVKEELYPGNLPSPKNQPAKVEVKVREGRAVNIHMFCTRRQGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCIEGQDVPPEQIKAVLLDSAGFHGTM* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1764 491 MobiDBLite consensus disorder prediction 360 385 - -
Aev06g1764 491 Gene3D - 294 364 IPR036638 GO:0046983
Aev06g1764 491 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 367 IPR036638 GO:0046983
Aev06g1764 491 MobiDBLite consensus disorder prediction 1 25 - -
Aev06g1764 491 Coils Coil 343 363 - -
Aev06g1764 491 SMART finulus 306 355 IPR011598 GO:0046983
Aev06g1764 491 Pfam Helix-loop-helix DNA-binding domain 307 349 IPR011598 GO:0046983
Aev06g1764 491 MobiDBLite consensus disorder prediction 249 304 - -
Aev06g1764 491 CDD ACT_UUR-ACR-like 420 480 - -
Aev06g1764 491 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 86 491 - -
Aev06g1764 491 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
Aev06g1764 491 PANTHER BHLH TRANSCRIPTIONAL FACTOR 86 491 - -
Aev06g1764 491 CDD bHLH_AtAMS_like 303 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1764 Aev-Chr6 14108836 14112977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1764 79 470 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 57.179 1.29e-122 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1764 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1764 - - aip:107647300 531.561