Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1752 ATGTCCATCTTGCCCTCACATACCCAGCCAGCACCATCGTCGTCTTCATCTGCTCCAACTCCAAACCCTAATTCCCAACATGGAATTTCAAATCCACTCCCTTCTTCTTCATCTCTCTCCCAGCACCTCAACCCTTCTTTCGGATCCCTCCGGATCTCCGATTCCCAATCTTCCCGTGAACATCCAGGTCCGTCAGCTCCAGCTGCAGAAAATTCCAGTGGACCTTCCGAAAAGGTGACAGAATCAGTGTCTCTAACGGGTATGAAGTCTTCACCTCAGCAAAACTCTGGAACACATTCTAGGAGTCACCCAGGAAGACGGGTAATTGGATCCTCTCAAAGAAATCAACAGGCCTCTGGGTCTGTAAATTCTCAGGGTAGCACCCCTCCAGCAGGAAGGAAATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCAATATGATCCAATATCCCGTTCTCAACCAAGGGGTCCTCCACCTCCTCCTCCAAGAAGGCAGCGGAAGAGAAAGCCATACAACAAGGATTTGTTTTTGCAGGCAAATTACAAATTCATGGTTCTGGACTCAGGAAATTATTCACCCGAGTCTATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCGACCCCATTTCCAGTTCAGTGTCCAATTTGTTTGGAGTATCCCCTGTGTCCTCAAATAACCTCATGTGGACATATTTTCTGTTTCCCATGTATTTTACAGTACTTGGTATTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTGTGCTTTGTGATGATATCTGCCAAGGATTTATATACCGTCCACATCACAAATGTCAAGCAGTATCGGGTAGGGGATACCATTGAGTTCACCTTTTTAACACGAAAAAAGGATTCATTTACTTTGTCACATAAAAATAAAGAAGAGACAGCTATCACATCATGTAGCAATGGAGAATTATGTGATCCCTTTTCCAAGTTCACACTCACATCAGATGTGGATCTCTCTGTTAGGAATGCAATATCAGATCTAGACGGCTGGCTGGCCAGAGCTGATTCAGGTCTTGTTGATGACCTGGAGAAGCTTCCTTATGTTTGTGATGCAATGCAACAATTGGAACAGAGGAAGAAATATTGGAATGAACATAGGGTTTCTGACAGTGGAAAGTCTTCGGGGCCTATTGATTATGAACATCAGATACCATCGGCAGTTGCAAATGCTATGGATTTTGAAGATGAAACCCATTCTAATGGATCAAAAACTTCCTCTACAGATTTCCCTGACCATAATAAGGGCATATTATTGGATAAGTCAATTGCTGAAACCAGCCCAGACCAAACTTTGGACGGGGAGAAAATACTTATAGAACAAGAAATTAATGTATCCTCTTCATATGAGGAGAAGAATGGTATTCAAAGGATTTCAAATGGCATTGGAGATATGAAGGAAAGTGACTCTTACAATTTCTACCAGGCTGCTGATGGCCAACATATAATTCTTCATACACTGAACATGAAGTGTTTACTTCGTCATTATGGGAGCTATGACATGCTTCCGCACAGAATAAGTGGAAGGATTCTGCAGTTAGAAACAGTTACCCAGTCCGAGGCCATGAGGAAGCGATATAGATTCCTAAGTCATTTTCCATTAACAGCAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGTTGCCTTCTGAAGCTCTGGCTCCATTTATGGATGAAATAAAGAAGCGAGCACATCAAAGGAAGCAACTTGCAAAGAAGGAACGGAAGGAAAAAAACAAGGCTGAAGCTGCTTCCACTTATTCTCTCCCCATTCCAAGTTATAAGCTTGCTTTTCATGATGATTCTCCCACATTTTCGATGGATGACTTTGAAGCCTTGGGGAATTCAGCTATGTCATCAAGTCCTCCAGTTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAATTGTTTTCGAACGTTACTAGGCTTGGCTTTGCTGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTCCACATAACAGCAATACGATCACGGATTCTTCTGGCACAGCAGGTCCAAGAACTGTGGAGACACAGACACCGTCATATTCCAATGTTATATCCAGAGCAGAATCTAATACGGCATTCCAGTTAGCTCCTAGCCAAGTTGTCCTTGGAAGGGGCTTTCTTGCAAAAGTGCAGATACAACCTGTAACACAGCGTAACAAGTTACGCTTCCATCTATCTGAAGCAAAAGCTTGGTCACTGTTCAGCGTTTCCAACTTCCAGAGCCAAAAACGTCGTCGTTTCTGCGAACTTTTGAAGACGAAGACGAAGAAGAAGAAGTTGTTCACTGCTAAAGATTCTCAATTCCATTTTCATGGCATTCTTCTAATCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTCTCTCTACCAATGGCTATGAGACAGCACAAGCTACTATCATCTTCATCTTCAAGCGTTAATCGGAGACCCACGATTCTGTATCTTGTGTGTGCCGTTGCATTATTCTCCTTCCTTCTCTTCGCTATCCAATCCTCTGTTTTCTCTGGGTCGCTGATTTCAGATCGCAATAGAGAGGAAATTCGCGTGTTGTATAACTTTCAGTCTAGTGTTCAACAATGTGTGGCTAACAGAGGGCTTGGACTCACTGCACATATTATTGACCACTGCAAATTGATCCTTAAATACCCTGAAGGCACCAACAGCACCTGGTACAATGAGCAGTTTAAACACTTTGAGCCTTTGGAGTATAACTTTGATGTGTGTGAGTCAATCTTGTTGTGGGAACAGTACCGTAACATGACTACAGTGTTGACCCGAGAATATCTAGATGCTCGTCCTGATGGCTGGGTAGATTATGCTCCACAAAGGATAGCTCAATTGGGGGCCAAAAAGTGCTATAATAAGACTCTTTGTGAAGAGAACCTCAATATATTATTACCAGCAAAACCTCCCTTTCATCCACGTCAGTTTCGTACATGTGCTGTTGTTGGAAATTCTGGCGATCTTCTGAAGACAGAATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGTGACAATGAGGCCCCGGTTAATGAGAAATATGCAAAGTACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGGGGTGCTGCTCGTAACATGGTCCCTATACTAAATGGGTCTGATGACGAGGTGCTCATAATCAAAAGTTTGACACACAGAGAAATCAATGCAGTTATAAAGACTATTCCAAACCCAGTCTATCTCTTCCAAGGGATTGTACTACGTCGAGGTGCCAAAGGAACTGGGATGAAATCTATCGAGTTAGCGCTCTCCATGTGTGATATTATTGATATATATGGTTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTTTCTGCTCCTAGGAAGGGACACAATCCACTTCAAGGAAGAGCGTACTATCAACTTCTTGAATGCCTTGGGTTAATAAGGATTCATTCCCCCATGAGATCTGCGAGGAAGCAAGACTGGTCGGACATACCAAGTAGAGAATTGATTAGCCAAGCACATGCCGCAGCATTGCGCTTGAAAAAGAGTCAAGCCGATCAGGCTGGTGATTTAGGGCAGTTTGTTGGTTGTAAGGTGTGGGGCAATGTGGACCCAGACAAAACTGGACCAATCTCAGGATCACCAGACATGAGTGATGTCCGCAAGCGTTCGAATTACAATAAATGGGAAATCATGCCATTTAAGAGTTTGAGGAAAGAAGCACAAGATCACTATATTCAGATGCAAAGAGTTTCTCTATATAAAATGGATGGCAATAAATTGGATGATCTAGTGTGTGTGAGACATTCCTTAAAATCTGAGGTGTAA 3906 0.4252 MSILPSHTQPAPSSSSSAPTPNPNSQHGISNPLPSSSSLSQHLNPSFGSLRISDSQSSREHPGPSAPAAENSSGPSEKVTESVSLTGMKSSPQQNSGTHSRSHPGRRVIGSSQRNQQASGSVNSQGSTPPAGRKSQMVNGNYLLNFQYDPISRSQPRGPPPPPPRRQRKRKPYNKDLFLQANYKFMVLDSGNYSPESMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLVLGEEDHKGDCWKRCPLCFVMISAKDLYTVHITNVKQYRVGDTIEFTFLTRKKDSFTLSHKNKEETAITSCSNGELCDPFSKFTLTSDVDLSVRNAISDLDGWLARADSGLVDDLEKLPYVCDAMQQLEQRKKYWNEHRVSDSGKSSGPIDYEHQIPSAVANAMDFEDETHSNGSKTSSTDFPDHNKGILLDKSIAETSPDQTLDGEKILIEQEINVSSSYEEKNGIQRISNGIGDMKESDSYNFYQAADGQHIILHTLNMKCLLRHYGSYDMLPHRISGRILQLETVTQSEAMRKRYRFLSHFPLTATFQLCEIDLSEMLPSEALAPFMDEIKKRAHQRKQLAKKERKEKNKAEAASTYSLPIPSYKLAFHDDSPTFSMDDFEALGNSAMSSSPPVMSSSPPVVGERKLFSNVTRLGFAAAHDSPSLQIQETSSPHNSNTITDSSGTAGPRTVETQTPSYSNVISRAESNTAFQLAPSQVVLGRGFLAKVQIQPVTQRNKLRFHLSEAKAWSLFSVSNFQSQKRRRFCELLKTKTKKKKLFTAKDSQFHFHGILLIFFFFFFFFSFSLPMAMRQHKLLSSSSSSVNRRPTILYLVCAVALFSFLLFAIQSSVFSGSLISDRNREEIRVLYNFQSSVQQCVANRGLGLTAHIIDHCKLILKYPEGTNSTWYNEQFKHFEPLEYNFDVCESILLWEQYRNMTTVLTREYLDARPDGWVDYAPQRIAQLGAKKCYNKTLCEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDDEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSAPRKGHNPLQGRAYYQLLECLGLIRIHSPMRSARKQDWSDIPSRELISQAHAAALRLKKSQADQAGDLGQFVGCKVWGNVDPDKTGPISGSPDMSDVRKRSNYNKWEIMPFKSLRKEAQDHYIQMQRVSLYKMDGNKLDDLVCVRHSLKSEV* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1752 1301 MobiDBLite consensus disorder prediction 1 136 - -
Aev06g1752 1301 MobiDBLite consensus disorder prediction 1 62 - -
Aev06g1752 1301 Coils Coil 584 604 - -
Aev06g1752 1301 MobiDBLite consensus disorder prediction 149 173 - -
Aev06g1752 1301 MobiDBLite consensus disorder prediction 675 706 - -
Aev06g1752 1301 MobiDBLite consensus disorder prediction 676 706 - -
Aev06g1752 1301 SMART ring_2 222 268 IPR001841 -
Aev06g1752 1301 Pfam Glycosyltransferase family 29 (sialyltransferase) 994 1066 IPR001675 GO:0006486|GO:0008373
Aev06g1752 1301 ProSiteProfiles Zinc finger RING-type profile. 222 268 IPR001841 -
Aev06g1752 1301 Pfam Zinc finger, C3HC4 type (RING finger) 222 268 IPR018957 GO:0046872
Aev06g1752 1301 Gene3D Glycosyl transferase family 29 940 1177 IPR038578 -
Aev06g1752 1301 MobiDBLite consensus disorder prediction 69 136 - -
Aev06g1752 1301 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Aev06g1752 1301 CDD RING-HC_RNF10 222 269 - -
Aev06g1752 1301 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 835 1300 IPR044782 GO:0008373|GO:0009846|GO:0009860
Aev06g1752 1301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 300 IPR013083 -
Aev06g1752 1301 SUPERFAMILY RING/U-box 221 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1752 Aev-Chr6 13993720 14012246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1752 111 700 C3H Transcription Factor Family AT3G26730 55.574 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1752 - - adu:107494651 1090.1