Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1660 ATGAATAATTCTTTTACTTCATCATCATCACCTTCGCCCAATAAGTCCAAGAAGAAGCAAACCTCGGCAGCGGCGGCGAAAGCGACGGCAACAACACAAGAGCAAAACCAACACGAAACGGCGTGGGGAGGGAGGTACCTCGGGGTAAGGAGGAGGCCGTGGGGGAGATACGCGGCCGAGATTCGTGACCCCTCCACTAAGGAGAGGCATTGGCTGGGCACGTTTGACACCGCTGAAGAAGCCGCCCTGGCATATGACAGGGCGGCCCGCTCAATGCGCGGATCACGTGCCCGAACCAATTTCGTGTACCCAGACACCCCACCGGGTTCATCAGTCACTCCAATCCTATCACCCGATCAACTCTCTCCCCAAACTCATCACAACCATGTCCATGACTTGTCCTCACTCTTCTCTTCCAACCCGCTCACCCAACAACCCGACCCGAACCCGACAATCGACCCGGTGACGTTATTGGAGGTGGCGGGTGGTAACAGTAACTGGGCCTATAGTTACGGTTATAACGGAAAGCAGCACAGTAACAATAATAATATTAGTTACTATAACTGTAATTATAATGAAGGTAGTGGTGGTGGTTTTCCAGAAGGTTCCAATTTTGGGCACGTGTTTTTTGAGGATGGTAGTACAAGCACAAGCACTAGTACTAGCAATAGTGTAGAACTTCCACCTTTGCCACCAGATATTACTAGCTCAGAGGGTTATGGCTATTATTGGGAGCAGAATTCTGGTGGGGATTTTGTGAATAGTCCCATCTTCAGCTCAATGCCTTCTGTGTCAGAGAATGTGCCAGGAACTACTCCTCAAGGTTTTGATTTGGGGGCCTCCTCTTATTTCTTCTGA 858 0.5 MNNSFTSSSSPSPNKSKKKQTSAAAAKATATTQEQNQHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPPGSSVTPILSPDQLSPQTHHNHVHDLSSLFSSNPLTQQPDPNPTIDPVTLLEVAGGNSNWAYSYGYNGKQHSNNNNISYYNCNYNEGSGGGFPEGSNFGHVFFEDGSTSTSTSTSNSVELPPLPPDITSSEGYGYYWEQNSGGDFVNSPIFSSMPSVSENVPGTTPQGFDLGASSYFF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1660 285 MobiDBLite consensus disorder prediction 1 40 - -
Aev06g1660 285 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 Pfam AP2 domain 46 94 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Aev06g1660 285 MobiDBLite consensus disorder prediction 104 128 - -
Aev06g1660 285 MobiDBLite consensus disorder prediction 99 128 - -
Aev06g1660 285 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 285 - -
Aev06g1660 285 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 7 285 - -
Aev06g1660 285 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Aev06g1660 285 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Aev06g1660 285 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1660 Aev-Chr6 12486446 12487303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1660 29 277 AP2-EREBP Transcription Factor Family AT5G13910 42.802 2.39e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g1660 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1660 K09286 - gmx:100809600 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1660 06 12486446 12487303 Aev06g1660 06 12486446 12487303 ECH