Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1575 ATGGAAATTCAGTTCCAGCAACCAAACCAAAAATCAACAAGCATTGGAATCACAAAAGGGAACAAGTTCAAAGGGAGAGGAAGGAACAACAACAACAATACAAACAAATTTGTTGGTGTTAGGCAAAGGCCTTCAGGGAGATGGGTGGCAGAGATCAAAGACACAACACAGAAGATAAGAATGTGGCTTGGCACATTCGAGACTGCGGAGGAGGCGGCGAGAGCTTACGACGAAGCCGCGTGCCTCCTCCGCGGATCGAACACTCGCACCAACTTCATAACTCATGTCTCTTTGGATTCTCCACTCGCTTCTAGGATCAGGAATCTTCTTAATAACAGAAAAGGTACCAAAAAACAGGACAATAATGTTGATGCAGATAACGAATCTGCATCAACAATCAGAACTACTACTACTAGTAGCCCTGGCAGCGGCGCTGCCAGTGCTATTAGTTGCGCTAGTTCTAGTAGTAATTCAATTTCAACCAACATAGAAAACAATGAGAACTCTGTTTCAACTGTGACAACTACTCAGAGCACACATGATGCTATTGATGATGCTTATAAGCCTGACTTGAGCAACTTTGAGAGCTCGAGGGACGAATTCGAGTCGGTTTCGCAGTCGAATTTTTCGTGGGGATCTTTGGGACAAGTCTTTGATCGTTTCTCTTTTGCTCATGTGTTGGATATTCCAAAGACTAGTACTGATGGAATAATTGCTGATACTGTTGACATGGAGCTTCTAGAGTTTGAGAGGATGAAAGTTGAGAGACAAATATCAGCTTCACTCTATGCAATCAATGGAGTTCAGGAGTACATGGCTGTTCAAGAGTCTAATGAGGCTCTCTGGGATCTTCCACCCTTATGCTCATTGTTCTGTTGA 879 0.4346 MEIQFQQPNQKSTSIGITKGNKFKGRGRNNNNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGTKKQDNNVDADNESASTIRTTTTSSPGSGAASAISCASSSSNSISTNIENNENSVSTVTTTQSTHDAIDDAYKPDLSNFESSRDEFESVSQSNFSWGSLGQVFDRFSFAHVLDIPKTSTDGIIADTVDMELLEFERMKVERQISASLYAINGVQEYMAVQESNEALWDLPPLCSLFC* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1575 292 MobiDBLite consensus disorder prediction 1 35 - -
Aev06g1575 292 MobiDBLite consensus disorder prediction 125 150 - -
Aev06g1575 292 MobiDBLite consensus disorder prediction 111 150 - -
Aev06g1575 292 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 17 278 - -
Aev06g1575 292 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 CDD AP2 36 92 IPR001471 GO:0003700|GO:0006355
Aev06g1575 292 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Aev06g1575 292 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 278 - -
Aev06g1575 292 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1575 Aev-Chr6 11576479 11577357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1575 33 292 AP2-EREBP Transcription Factor Family AT5G19790 41.264 1.67e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g1575 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1575 K09286 - gmx:100782886 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1575 06 11576479 11577357 Aev06g1575 06 11576479 11577357 ECH