Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1520 ATGAGTTCTCATCACTTGAAAAACAATGGTGATGTTTTCATCAATGGAGGAGATAACAACATGATGATGATGATGAGGTTTCTCACTTCATCTTCATCATCCCCTGTTCCTTCTCCTTCTTCTCTTCCTCTGGGGTTTCAGATTCTGAACCCCACCTCAGTAGAATGGAGGGGAACAAAGAGGACCAATGATGAGTGTGTTGGTGTTGAGAACAAGAGATTGGCTTTGAAACTTGGTGAGGAAGAGGAAGTAGAAGAAGAAGATGAAGAAGAATCATCTAAGAACCCTGTTACTGCAGGAGGGAAAATTGGACATGTTAAGCTTTGTGCTAGAGGTCATTGGAGACCTGCAGAAGATGAAGAGCTTAAGGCACTTGTTGCACAATATGGCCCTCAAAATTGGAACTTGATTGCAGAACATCTCAAAGGAAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCTAGGATTAACAGAAGGGCTTTTTCTGAGGAGGAAGAGGAGAGGCTTTTGGCTGCACACAAAATGTATGGTAACAAATGGGCCATGATTGCTAGGCTCTTCCCTGGAAGAACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGGAAGCATAGGGAACAGTCAAGCATGTATAGAAGGAGAAAACCATCTTGTTCTTCTTCTGTTTCTGCTGAAAAATGCTTTCCAAAGGATTTGAATCTGACCCTATCAAACCACAATGCAGCAAGTGATCAGCTAACATTATCAGATGAATCTGCCTCAACTTGCACTAACCTCTCCCTCACTCCTTCCTCAACAAAACTCACTTCTCATCCTAGGCCTTTTCATAATCTGAGTCCAGGATCACTAATAGGTGTTTGTGAAGAGAAGAGTGTGGTGGGTTTTGACAAGTTTTGTGGTGGTGCTTGGAATAATGGGACATGTGAGGTTTCTGCAACCGTGGGGGGAAATAAGCTTATGAGTGTGGACCAATCCAATCTCTCAGATTCTAACTCTGAAGTTTCAGTGTCTGAGTCAGTTGCCACCAATAGGTCCAACCTCTCATCATCAGGTTATGGGGAAAGTGAAAACAACAATAACAGCAACAAGATTAACAGCAACATGCCACCACCATTCATTGATTTTCTTGGGGTAGGAGCTACATAA 1170 0.4248 MSSHHLKNNGDVFINGGDNNMMMMMRFLTSSSSSPVPSPSSLPLGFQILNPTSVEWRGTKRTNDECVGVENKRLALKLGEEEEVEEEDEEESSKNPVTAGGKIGHVKLCARGHWRPAEDEELKALVAQYGPQNWNLIAEHLKGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLLAAHKMYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSMYRRRKPSCSSSVSAEKCFPKDLNLTLSNHNAASDQLTLSDESASTCTNLSLTPSSTKLTSHPRPFHNLSPGSLIGVCEEKSVVGFDKFCGGAWNNGTCEVSATVGGNKLMSVDQSNLSDSNSEVSVSESVATNRSNLSSSGYGESENNNNSNKINSNMPPPFIDFLGVGAT* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1520 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 157 IPR017930 -
Aev06g1520 389 CDD SANT 174 205 IPR001005 -
Aev06g1520 389 SUPERFAMILY Homeodomain-like 111 204 IPR009057 -
Aev06g1520 389 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Aev06g1520 389 PANTHER MYB PROTEIN-RELATED 70 389 - -
Aev06g1520 389 MobiDBLite consensus disorder prediction 332 376 - -
Aev06g1520 389 ProSiteProfiles Myb-like domain profile. 111 157 IPR001005 -
Aev06g1520 389 SMART sant 162 210 IPR001005 -
Aev06g1520 389 SMART sant 110 159 IPR001005 -
Aev06g1520 389 Pfam Myb-like DNA-binding domain 114 174 - -
Aev06g1520 389 MobiDBLite consensus disorder prediction 78 99 - -
Aev06g1520 389 Gene3D - 111 162 - -
Aev06g1520 389 PANTHER OS08G0435700 PROTEIN 70 389 - -
Aev06g1520 389 Gene3D - 164 234 - -
Aev06g1520 389 CDD SANT 114 155 IPR001005 -
Aev06g1520 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 212 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1520 Aev-Chr6 10958951 10960489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1520 110 227 MYB Transcription Factor Family AT1G69560 84.746 2.02e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g1520 Myb_DNA-bind_6 4.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1520 K09422 - gmx:100791795 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1520 06 10958951 10960489 Aev06g1520 06 10958951 10960489 ECH