Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1511 ATGGGAAGACCTCCTTGTTGTGACAAAGTTGGCATCAAAAAAGGTCCATGGACACCTGAGGAAGATATCATCCTTGTCTCTTACATCCAAGAACATGGTCCTGGAAATTGGAGATCAGTTCCTACTAATACAGGGTTGTCAAGATGCAGCAAAAGTTGCAGGCTTAGATGGACAAATTACCTGAGGCCAGGAATCAAGAGAGGCAACTTCACTCCTCATGAAGAAGGAATGATCATTCATTTGCAAGCTCTTCTGGGTAACAAATGGGCAGCCATAGCTTCCTACCTTCCACAAAGAACAGACAATGATATAAAGAATTATTGGAACACACATCTAAAGAAGAAGCTGAAGAAATTCCAAGCATCAGGCATGGACCCCCACATGGCATCATCAGACTCAACAACAAACAACAACACCACTTCCCACCAGTATCTATCCAATAAGAGCTTTAATGACAGAAGAAGCAGTAATTTAGATATAAGCATCAACAATAACAACAACAACAATGGCTCAGTATCATCATCATCAACAACATATGCATCAAGCACTGAGAACATCTCAAGGCTCTTAGAAGGTTGGATGAGAGCTTCTCCAAAGTCACAGCAACTGAAAGGAACACAAAACCAATTGGAGATTCAAGGATTTGAGGAACAGAGCAAGCTAGTGAAGTCTGTTTCTTTGCCTGCTTTGAACCTTCAGCTTCAAAACAGGACAAAACTAGATAATAATGATGATGAGAAAGAGTTTGATTCTATTTTGTCATTTGAGAATCTTAATAGTGCTGCTTGGGACAAATCTACTTGTGATTCCATGCCTGAAAATGAAAAGAGTGATCAAAAGGGTCATCATGATCATGATCATAATCATGATGGGGCAGAGAAGAATTATAGGCAAAAATCTGAGAACAGTAATAGTAATAATGGTGCTCCTCCTTTGTCATTTCTTGAGAAGTGGTTATTGGATGAAAATGTTGGTCATGGGGAGGAGATGATGGAGTTATCTTCTCCTATGTTCTAA 1017 0.3963 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQASGMDPHMASSDSTTNNNTTSHQYLSNKSFNDRRSSNLDISINNNNNNNGSVSSSSTTYASSTENISRLLEGWMRASPKSQQLKGTQNQLEIQGFEEQSKLVKSVSLPALNLQLQNRTKLDNNDDEKEFDSILSFENLNSAAWDKSTCDSMPENEKSDQKGHHDHDHNHDGAEKNYRQKSENSNSNNGAPPLSFLEKWLLDENVGHGEEMMELSSPMF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1511 338 CDD SANT 69 112 IPR001005 -
Aev06g1511 338 Gene3D - 13 66 - -
Aev06g1511 338 MobiDBLite consensus disorder prediction 269 297 - -
Aev06g1511 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev06g1511 338 MobiDBLite consensus disorder prediction 266 312 - -
Aev06g1511 338 CDD SANT 16 61 IPR001005 -
Aev06g1511 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev06g1511 338 MobiDBLite consensus disorder prediction 119 179 - -
Aev06g1511 338 SMART sant 66 114 IPR001005 -
Aev06g1511 338 SMART sant 13 63 IPR001005 -
Aev06g1511 338 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev06g1511 338 Gene3D - 68 169 - -
Aev06g1511 338 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev06g1511 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev06g1511 338 MobiDBLite consensus disorder prediction 126 179 - -
Aev06g1511 338 PANTHER TRANSCRIPTION FACTOR MYB60 1 328 - -
Aev06g1511 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g1511 338 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev06g1511 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1511 Aev-Chr6 10862270 10863798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1511 1 203 MYB Transcription Factor Family AT5G62470 51.737 1.52e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g1511 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1511 K09422 - gmx:100817854 434.491