Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1456 ATGGCGGCGGAAAGACTAACTCTAGGCAATGGCGAGGACAGAAAAATGAAGCGCGTGATGGAGGAGGATCAATATGAGTCACTCTTGGGACGCACCAAAGAACCACCACCATCATCACAACGTTTGTCATCACTTCTCACCCTTCAGCATGATGACCGAATCTTTTGTTGCAAGATATGCAACAAAAGGTTCATTAAAAGTCAAGCACTTGGTGGACACCAAAATGCCCATAGACGGGAGCATGCTATGATCAAAAGAGCTAACAAGAGATCACAATTGGATCTATATGGAGTTGGTAATGGTATTGGTATTGCCGGTGGTAACTTTGGTTCCCACCGCTATTATGGATACCCATCACCAATACCAGCAAGTCTTCACTATCATCAAGGATCATCAACAACACCCTCATCAGCCCTATTTTCACACCAATACCATGGTGGTGCGATGAGGGGTCACGCGACCAGTCACGTGACTGGTCGCGTGTCCTTGACACCAACATATCCACAACTTGGTGTGGCAGCAGCAATAGTAGCTAGAGCTAGAGGAGGATTTGGGATGGCAAGCTCATGGGAAAGGGGGCGCACCGGTGCTCCGAGTATGCTAAACTACAATAACAATGGGGGAATTTTCAATGGAGTGAACCAAATCCCTTGGCTTTTTTCTGAGAGCAATAACAATGGGAATCACGGTGGATCAGCACCAAATGATGAAGAGCTCGATTTGAACCTTAAGCTTTAA 738 0.4634 MAAERLTLGNGEDRKMKRVMEEDQYESLLGRTKEPPPSSQRLSSLLTLQHDDRIFCCKICNKRFIKSQALGGHQNAHRREHAMIKRANKRSQLDLYGVGNGIGIAGGNFGSHRYYGYPSPIPASLHYHQGSSTTPSSALFSHQYHGGAMRGHATSHVTGRVSLTPTYPQLGVAAAIVARARGGFGMASSWERGRTGAPSMLNYNNNGGIFNGVNQIPWLFSESNNNGNHGGSAPNDEELDLNLKL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1456 245 MobiDBLite consensus disorder prediction 8 29 - -
Aev06g1456 245 MobiDBLite consensus disorder prediction 1 41 - -
Aev06g1456 245 SUPERFAMILY beta-beta-alpha zinc fingers 51 82 IPR036236 -
Aev06g1456 245 ProSitePatterns Zinc finger C2H2 type domain signature. 56 77 IPR013087 -
Aev06g1456 245 Gene3D Classic Zinc Finger 39 96 - -
Aev06g1456 245 PANTHER ZINC FINGER PROTEIN JAGGED 43 245 IPR045320 GO:0003700
Aev06g1456 245 MobiDBLite consensus disorder prediction 225 245 - -
Aev06g1456 245 Pfam C2H2-type zinc finger 55 80 - -
Aev06g1456 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1456 Aev-Chr6 10293038 10293775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1456 53 87 C2H2 Transcription Factor Family AT1G24625 62.857 5.44e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g1456 zf-C2H2_6 3.4e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1456 - - ahf:112757344 95.9005