Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1454 ATGGTGGAGGCCAGTCAACCACCACCAAATTCAAACAAGCGCAAGTCCATCGTTTTAGGAGCACCCGCTCATCATCCTGATGAGCGTGTTCCAAAAATTCCAAGAACGGGTGGGCTTGCTACTCAGGAGAAGACAAGTGGTGATGACGAAAACATACCACCTTCGCTCCGCCAAGAAAATAGAGGAACCATTGTTAACCCAATAAGGGCTAATACTCTTAATGTTCCTCAAGTTTACATATGTGACTTTTGTAACAAGAGATTTCCATCTGCCCAAGCACTTGGTGGCCACCAAAATGGCCATAAACATGAAAGACAAATGAGAAGTGAAATAGAGGCCATGAACAAGGTGGCCATGGAGCAACAAACACTCCCAACAAGCTTAATGGCTTTCTCTGGGGCTTATGGGCCTAGCTTCACCCCAATGAGCACAACCAATCAGTTCCTCCCAAGCAGTTACAATTACGGTTACAACAATAACAACAACAACATGATGATGAATCCTATGATGATGGGGTATGGGAATCATCATCAACCAAAAAATGGTGTCCCAATTAATGGAACATTCCAACATGGAGTCAACTATCTCAATCCTGGCTATCAAACTGGTTATTACAATAATGTTGGTGGGTATTATGGGAGTTATGGTGCTCTAGGCTCTGGATATGGTGGTGCAATTTACCATCCACAACGATCGTTATACAATTATCCTGAATTTGAAACTGGTAATCACAGTGGTGGTGGTGGATCCAGCTACTATGGTGCATTCCAGCAGCCTAATCCAGTGTGGATTAATGAAGGAGGGATGTTGATTCCGAGCACGGCTGGTTATTATGTTGGAATTAATAATAACAACAACAGTTATGGTCTTTACCAAGGACAAGTTGCTGATGCAATGGCCTATGGGCCACAGCAGCAACGTGTAAATGATACACTGTCAATGAATGATAATCATCGTTATCAAAACACCGGAACCCATGGTCAACAACAGGTTGCAATGGTGGGTATGGGTTCTGGGCCGGTTCCTGAAGAAAGAGATGTTGGTCATGGAGGCCCTCAAAACATTCAAGAGGAAGAAGAAGGAGCCATTGATTTGACCCTTAGGCTATAA 1110 0.4369 MVEASQPPPNSNKRKSIVLGAPAHHPDERVPKIPRTGGLATQEKTSGDDENIPPSLRQENRGTIVNPIRANTLNVPQVYICDFCNKRFPSAQALGGHQNGHKHERQMRSEIEAMNKVAMEQQTLPTSLMAFSGAYGPSFTPMSTTNQFLPSSYNYGYNNNNNNMMMNPMMMGYGNHHQPKNGVPINGTFQHGVNYLNPGYQTGYYNNVGGYYGSYGALGSGYGGAIYHPQRSLYNYPEFETGNHSGGGGSSYYGAFQQPNPVWINEGGMLIPSTAGYYVGINNNNNSYGLYQGQVADAMAYGPQQQRVNDTLSMNDNHRYQNTGTHGQQQVAMVGMGSGPVPEERDVGHGGPQNIQEEEEGAIDLTLRL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1454 369 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Aev06g1454 369 PANTHER ZINC FINGER PROTEIN 2 62 369 - -
Aev06g1454 369 ProSitePatterns Zinc finger C2H2 type domain signature. 81 103 IPR013087 -
Aev06g1454 369 Gene3D Classic Zinc Finger 67 131 - -
Aev06g1454 369 SUPERFAMILY beta-beta-alpha zinc fingers 74 109 IPR036236 -
Aev06g1454 369 MobiDBLite consensus disorder prediction 338 365 - -
Aev06g1454 369 Pfam C2H2-type zinc finger 78 98 - -
Aev06g1454 369 PANTHER ZINC FINGER PROTEIN JAGGED 62 369 IPR045320 GO:0003700
Aev06g1454 369 MobiDBLite consensus disorder prediction 39 60 - -
Aev06g1454 369 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1454 Aev-Chr6 10279051 10280383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1454 22 144 C2H2 Transcription Factor Family AT1G80730 27.481 2.74e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g1454 zf-C2H2_6 2.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1454 - - adu:107494137 84.7297