Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1439 ATGAGGGAAGAGGATTCAAATTGGTTCTCACGATGGGAAGAGGAACTTCCACCACCAGAGGAACTTATGCCCTTATCACAAACCCTAATCACACCCGATCTCGCCATCGCTTTCGACATCCCTAACCCTCACACACCCACCGCCGCCGTAACCGCCACCACTCCAACTACTCCTCAACCTCTCCACCACCACCTTCAACAACCACCTCAACCACCACCCTCATCCAACCCATCCCCGTCGCACCAACAACAGCCCTCCTCCGGCGGAGACTTCGCTGATTCCGGCGATCTTGGTTCTGGCGGTGGCGCTGGCGAGGAGCCCGCTCGGACACTCAAGCGTCCCCGCCTCGTGTGGACCCCTCAGCTTCACAAGCGCTTCGTCGACGCCGTTGCGCACCTCGGAATCAAGAACGCAGTTCCGAAGACTATAATGCAGCTTATGAGCGTCGACGGATTGACCCGCGAAAACGTCGCCAGTCACCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGGGCTCTCCGCCGCAGGGGCTGGAGGTGCCGGAGGTGGAGCTGGTGGCGCCGGTGATGCCGCCACCGATCATCTCTTTGCCAGCTCGCCAGTACCGGCGCACTTCCTTCACCCAGCTGCGGCTGCGGCAGGGAGGCCTAATTCGGAGCATTACCTGCCGTTTGTGCCAGTTCCGGCGATCCACCACCACCATCACCAACAGCACCAGCAGCAGATGGCAGCGGCTGCGGCGTTGCAGATGCAGCCGCAGTATCACCGGCAGGCAGTGGCGGGGCATTTCGGTTCACCACCGAATGGGCACTTTGAGCATCCTTTCATGTCTAGACAGCAGCATCAGCAGCAGCAACAACAGATTCATAGGATGGGGGGACCTGTTGGTGGATATGTTGAGGACATGGAATCTGCTAATGCATCTGGAGGGAGGAAGGGAAGCTATGGATATAATCTTGGTGGTACTAATTGTGGTTGTGCAGTGTCGAGACTTCCTGTTCTGTTGATTCGTCCCTTAGTAATGTGGGAATCGGCTGCAGCTCTGTATAGACCAGATTGTTACTGCTTGGGAAGTTTTCTATTGGCATTGATGGCAGGATTGGACAAAATGCGACGAGTTTTGGTGCTTATGGGCCTGCAGATTGGACCAGGATCTTAG 1164 0.567 MREEDSNWFSRWEEELPPPEELMPLSQTLITPDLAIAFDIPNPHTPTAAVTATTPTTPQPLHHHLQQPPQPPPSSNPSPSHQQQPSSGGDFADSGDLGSGGGAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAAGAGGAGGGAGGAGDAATDHLFASSPVPAHFLHPAAAAAGRPNSEHYLPFVPVPAIHHHHHQQHQQQMAAAAALQMQPQYHRQAVAGHFGSPPNGHFEHPFMSRQQHQQQQQQIHRMGGPVGGYVEDMESANASGGRKGSYGYNLGGTNCGCAVSRLPVLLIRPLVMWESAAALYRPDCYCLGSFLLALMAGLDKMRRVLVLMGLQIGPGS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1439 387 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 309 - -
Aev06g1439 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 169 IPR017930 -
Aev06g1439 387 MobiDBLite consensus disorder prediction 46 61 - -
Aev06g1439 387 Gene3D - 110 172 - -
Aev06g1439 387 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 309 IPR044841 GO:0003700|GO:0006355
Aev06g1439 387 MobiDBLite consensus disorder prediction 62 79 - -
Aev06g1439 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 114 166 IPR006447 GO:0003677
Aev06g1439 387 MobiDBLite consensus disorder prediction 1 112 - -
Aev06g1439 387 MobiDBLite consensus disorder prediction 1 18 - -
Aev06g1439 387 SUPERFAMILY Homeodomain-like 110 170 IPR009057 -
Aev06g1439 387 Pfam Myb-like DNA-binding domain 117 165 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1439 Aev-Chr6 10111344 10113409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1439 1 313 G2-like Transcription Factor Family AT3G10760 54.493 1.10e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev06g1439 Myb_DNA-binding 3.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1439 - - aip:107623693 350.517