Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1433 ATGACCATGAAGTCACTGGATCAGTGGAGGAGTTACTTCAGGTCAGCAAACTCCGATATATTCGATATAATCGACCATGCGATCATGGTGGCCGCTTCGGATTGTCCTAAGGAGTTCAGGCTGAGGAGGGAAGCTGGGGCAAGCAAGGAGAGCAAGGTGAATAGCTCAAGGGATGATAATCATGGCGACATGGATGCCAATAGGGTCAGCAATTACAGCTTTGGTGAAGTTGATGTTGAGGCTTTGACTGATGAGATTGAAGAGGAGTCTCAGTTTGTTGGTGAGGTCTTGAGGATCAGAGACATTCTTCATAATCGTCAAGATGAGTCTGATGCAGTGTTGTTTGAGTCCTTGAGGAGGCTCCAGCTGATGGAACTCACTGTGGATTGTTTGAAGGCAACCGAGATTGGAAAGGCTGTTAATCCTCTCCGGAAGCATGGATCGAAGGATATTCGTCAACTCGCACGCACTCTCATCGATGACTGGAAAGAAATGGTAGACGAGTGGGTCAAAGCTACAGCTACCACAGCTATTGCAGGATCAGAAGGTACTCCTGATTCGATAAATCCATCTGTTGTTGATGAAGAGGAAGGACTTCCATCACCTCCTATGGATGAAGGGGCTTTCTTTGTAGCCCCAACCGGTTCAATAGAACTCTCACAGTTCTTCGATGGCATGGATGATTTTGCAAATCCTCGACAGAGTGGGCAATTCAACAAGAACCGTGAAAATGTGAGAAAGCCTTCTATGGACAGTCAAAATATAGAAAAGAGGAAACTGCAGGCTTCCAACGGGGCGAACATAACTGCCAAGGACAATAAGATTCAGCCAGTAAGGAAAAATGAGGTTGCCATTAGGCCAAATAAACCAGTAGCTGCTGATTCTGGCCCCAGGAGACCACCAAAATCAAGCGTGCAGCCAAAGATGCAACAAAAGACGGAGAATAATCCAACCATGAGGCGGCCTCCCACTGTCCAGCAAGATAAATCGAAGTGCTCCGTTGAGTTGAAGCTAGAAGCCACGAAGAGGAAACTTCATGAGAGTTACCAACAAGCCGAAAATGCGAAGAGGCAGCGGACGATACAAGTAATGGAATTGAACGACCTCCCCAAGCAAGCAATTGTCCACCGAAATCCGCATTTCAAACCCGGAAATCACAATAGGAACTGGGGCCACGGGCGAAGATAG 1188 0.4714 MTMKSLDQWRSYFRSANSDIFDIIDHAIMVAASDCPKEFRLRREAGASKESKVNSSRDDNHGDMDANRVSNYSFGEVDVEALTDEIEEESQFVGEVLRIRDILHNRQDESDAVLFESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLARTLIDDWKEMVDEWVKATATTAIAGSEGTPDSINPSVVDEEEGLPSPPMDEGAFFVAPTGSIELSQFFDGMDDFANPRQSGQFNKNRENVRKPSMDSQNIEKRKLQASNGANITAKDNKIQPVRKNEVAIRPNKPVAADSGPRRPPKSSVQPKMQQKTENNPTMRRPPTVQQDKSKCSVELKLEATKRKLHESYQQAENAKRQRTIQVMELNDLPKQAIVHRNPHFKPGNHNRNWGHGRR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1433 395 CDD TFIIS_I 95 167 - -
Aev06g1433 395 ProSiteProfiles TFIIS N-terminal domain profile. 94 169 IPR017923 -
Aev06g1433 395 MobiDBLite consensus disorder prediction 304 331 - -
Aev06g1433 395 Coils Coil 338 358 - -
Aev06g1433 395 Pfam TFIIS helical bundle-like domain 118 166 IPR017923 -
Aev06g1433 395 MobiDBLite consensus disorder prediction 178 201 - -
Aev06g1433 395 MobiDBLite consensus disorder prediction 255 271 - -
Aev06g1433 395 MobiDBLite consensus disorder prediction 46 67 - -
Aev06g1433 395 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 85 178 IPR035441 -
Aev06g1433 395 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 92 173 IPR035441 -
Aev06g1433 395 SMART TFS2_5 93 168 IPR003617 GO:0005634
Aev06g1433 395 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 394 - -
Aev06g1433 395 MobiDBLite consensus disorder prediction 381 395 - -
Aev06g1433 395 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 394 IPR044805 -
Aev06g1433 395 MobiDBLite consensus disorder prediction 230 331 - -
Aev06g1433 395 MobiDBLite consensus disorder prediction 376 395 - -
Aev06g1433 395 MobiDBLite consensus disorder prediction 46 65 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aev06g1433 Med26 4.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1433 - - gmx:100775579 540.421