Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1428 ATGGCATCAAGCTCAATGTCAGCGTCGTCTGGGGCATGGAGTGCGAAGGAGAACAAGGCGTTTGAGAGGGCACTGGCAGTGTATGATAAGGACACGCCAGACCGATGGTACAATGTGGCGAACGCTGTTGGAGGAGGGAAGACCCCTGAGGACGTTAAGAGGCACTATGACCGCCTTGTCCACGACGTCAAGTACATTGAGTCTGGCCAAGTCCCTTTCCCTTACAAGAAAGCCTCCGATCACCAAGAGAAGAGGCTTAAGAACCTGAAGCTGAATTGA 279 0.5269 MASSSMSASSGAWSAKENKAFERALAVYDKDTPDRWYNVANAVGGGKTPEDVKRHYDRLVHDVKYIESGQVPFPYKKASDHQEKRLKNLKLN* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1428 92 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Aev06g1428 92 SUPERFAMILY Homeodomain-like 11 68 IPR009057 -
Aev06g1428 92 CDD SANT 17 60 IPR001005 -
Aev06g1428 92 Gene3D - 3 73 - -
Aev06g1428 92 ProSiteProfiles Myb-like domain profile. 5 60 IPR001005 -
Aev06g1428 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Aev06g1428 92 ProSiteProfiles SANT domain profile. 8 56 IPR017884 -
Aev06g1428 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 91 - -
Aev06g1428 92 SMART sant 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1428 Aev-Chr6 9985726 9987204 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev06g1428 Myb_DNA-binding 5.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1428 - - gmx:100804396 142.124