Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1420 ATGATGGACACTAATAACTCTGATCTGTTCCAATTCCTCGCAGGAGGAACCAATAATAACAACACCACCAACGGTGCCTCCTTCTTCAGTGCTACTGCACCACCCTACGCAGAAGAAGCACTTTCATCTATGATGATGATGCACCACACCTTCTCCACTTCCTCAACTTACTACCCTCTCGAGTTCTCCGAAATCACCGATAATAACAACAACAACAGTGCGGCCTCGCAACGAGACAGAGCACTCGCTGCTATGAGGAATCACAAGGAAGCAGAGAAAAGAAGACGAGAGAGAATCAACTCACACCTCGCTCGTCTTCGTACTCTCCTTCCTTGTAATTCCAAGACAGATAAGGCTTCACTTCTAGCGAAGGTAGTCCAGAGAGTGAAAGAGCTAAAGCAACAAACATCAGAAATCACGGATCTCGAAACCGTCCCGTCGGAAACGGACGAGATCACGGTGCTATCGGCGGCGGGCGGCGAGGGGAGGCTGATATTCAAGGCTTCAGTGTGCTGCGAGGATCGGTCGGAGCTGATCCCGGAGCTGATAGAGATCCTGAATTCGCTTCAGCTGAAAACGCTGAGAGCGGAAATGGCGACGCTGGGCGGAAGAACGCGGAACGTGCTGGTGGTTGCGGCGGAGAAAGAGCAGAGCATTGAGTCGATTCATTTTCTTCAGAACTCGCTCAAGTCGTTGATTGAGCGTTCCTCCAATTCTAGCGACAGGTCCAAACGACGTCGTGGCTTGGACCGAAGGTTCAATGCTTGA 768 0.5091 MMDTNNSDLFQFLAGGTNNNNTTNGASFFSATAPPYAEEALSSMMMMHHTFSTSSTYYPLEFSEITDNNNNNSAASQRDRALAAMRNHKEAEKRRRERINSHLARLRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITDLETVPSETDEITVLSAAGGEGRLIFKASVCCEDRSELIPELIEILNSLQLKTLRAEMATLGGRTRNVLVVAAEKEQSIESIHFLQNSLKSLIERSSNSSDRSKRRRGLDRRFNA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1420 255 PANTHER TRANSCRIPTION FACTOR BHLH30 31 253 IPR045847 GO:0003700|GO:0006355
Aev06g1420 255 Pfam Helix-loop-helix DNA-binding domain 87 132 IPR011598 GO:0046983
Aev06g1420 255 CDD bHLH_AtAIG1_like 79 154 - -
Aev06g1420 255 MobiDBLite consensus disorder prediction 236 255 - -
Aev06g1420 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 141 IPR036638 GO:0046983
Aev06g1420 255 Gene3D - 78 143 IPR036638 GO:0046983
Aev06g1420 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Aev06g1420 255 MobiDBLite consensus disorder prediction 237 255 - -
Aev06g1420 255 SMART finulus 89 138 IPR011598 GO:0046983
Aev06g1420 255 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 31 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1420 Aev-Chr6 9896495 9897521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1420 3 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 55.785 6.67e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1420 HLH 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1420 - K22484 gmx:100802566 305.064