Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1415 ATGCCTTACCTTGTCCGAGACAATCTGTTCATCGGAGACATCGGCGACGCGGCGGAGATTCTCCAAAACGGCAGCGCAGAGATCACTCACATACTCTCCGTCCTCAGCTCCGCCTCCATCTCCTTCTTCTCCGAATGGCGCCCAAGCCTCACCATCCCCGTCAAGGAGATCGATAAGGCTTACGTCGCCGGGAAAGACTCCGCCGGAGATGGTAGCTCCAAGAGCGCTCTCTCGCCCGAGAGGCTCCTCTACTCGCTGGAGTACGCAGGACGGGACTTGAAGCTCGTGAGGATGGCTGTGCCTATTAAGGACACTGAGAACGAGGACTTGCTTGATTACTTTGAAGTCTGCATCGACTTCATCGATCGGAGTAGGAAGGAAGGTTCCGTTTTGGTTCACTGTTTCGCTGGAGTTTCTAGAAGTGCGGCGGTTATAACGGCGTATTTGATGAGAACGGAACGCCTCTCTCTAGAAGATGCTCTTGAATCATTAAGGCAGAGCTGTGAAGTTGTTTGCCCCAATGATGGCTTTCTAGAGCAGTTGAAAATGTTTGAGGAGATGGGCTTCAAGGTTGATCAGTCTAGCCCTATATACAAGCGCTTTCGTCTGAAAATACTTGGCGAGAATCATTTCTCAGGACTAGGGATAGACAGTTCTAAACTTGGTGCAGATCCTGGCATGCCGGTCCAAATTTCTTCTGAGGTTGAAGGAGCTACTAAAGCAGAAAATAAACGCATTCCTACCTATCGCTGTAAGAAGTGCCGACGGATTGTCGCATTGCAAGATCATGTTGTAGATCATATCCCTGGTGAGGGTGAGACATCTTTTGAGTGGAACAAGAGGAGAAGCGGCAACCCTTTTAACAAGTCTAATGAATCTGAGTGTTCATCCATATTTATTGAGCCTCTACGATGGATGAAAGCTGTTGAGGAAGGCGCGTTGGAGGGAAAGCTGTCTTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGCGGAAGCTGGATTACCCCAGCTTTTCAACTCCACAAAAGTCGGGTGGATATAAGCCCTATTTTTCCAAGATGTTACACGGCCGATGAAATTGTCGACGGAGGATTGAAGTCTCGTTCCTTGGACCTTTATTCTGCTCAATTTTTCCAGGCTGAACCAATGAAAGCAGTTAATGCAAGGCAGGATTGTAGTAGCTCACTGCCTTTGCTTCTTCCAGATTGA 1236 0.4862 MPYLVRDNLFIGDIGDAAEILQNGSAEITHILSVLSSASISFFSEWRPSLTIPVKEIDKAYVAGKDSAGDGSSKSALSPERLLYSLEYAGRDLKLVRMAVPIKDTENEDLLDYFEVCIDFIDRSRKEGSVLVHCFAGVSRSAAVITAYLMRTERLSLEDALESLRQSCEVVCPNDGFLEQLKMFEEMGFKVDQSSPIYKRFRLKILGENHFSGLGIDSSKLGADPGMPVQISSEVEGATKAENKRIPTYRCKKCRRIVALQDHVVDHIPGEGETSFEWNKRRSGNPFNKSNESECSSIFIEPLRWMKAVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPIFPRCYTADEIVDGGLKSRSLDLYSAQFFQAEPMKAVNARQDCSSSLPLLLPD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1415 411 CDD DSP_DUSP12 4 192 - -
Aev06g1415 411 Gene3D Protein tyrosine phosphatase superfamily 4 207 IPR029021 -
Aev06g1415 411 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 355 - -
Aev06g1415 411 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 190 IPR029021 -
Aev06g1415 411 ProSitePatterns Tyrosine specific protein phosphatases active site. 132 142 IPR016130 GO:0016311|GO:0016791
Aev06g1415 411 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 111 166 IPR000387 GO:0016311|GO:0016791
Aev06g1415 411 SMART dsp_5 1 187 IPR020422 GO:0006470|GO:0008138
Aev06g1415 411 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 190 IPR020422 GO:0006470|GO:0008138
Aev06g1415 411 Pfam Dual specificity phosphatase, catalytic domain 97 186 IPR000340 GO:0008138|GO:0016311
Aev06g1415 411 PIRSF DUSP12 3 56 IPR016278 GO:0006470|GO:0008138
Aev06g1415 411 PIRSF DUSP12 87 366 IPR016278 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1415 Aev-Chr6 9832095 9834920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1415 95 186 Protein tyrosine phosphatase (PTP) family AT3G06110 38.710 6.82e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1415 K14819 - gmx:100804683 590.497