LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g1403	ATGGGTAGTAGAGGTAGAACAGTTAACGTTAGCACTCAGGACACTAACAACAACGTTGTCAACGGCATGCCAAGCTACGCTCCTCCTTTGCCTTCTTCTTCTACTTCCATGGGCATAGACGCAACTAATGTTCTTCCGTCTCGAATTTCTGAGTTTGGAACCCTTGAGCAGTCTCTTGGATTTCGCGTTGAGGATGCCATCAATCTTAGCAGAAATCCAGTGTTTAATCAAATGAAATCAAATAGCCAGGGTCTAGGTGCTGATGTTCATTTTGGTGCTTTAAATAAGTCCATTGCAAACTCAGATATAAACCTATCCGCCGCAATTGCTGGGTCTCAGACTTTGCCATTACATAAAGATTCACAACCTAATCTGGCCTCGACATCTGGAGGTCATCGTGAAAATTGGGGAGAGTCCAACATGGCAGATGGAAGCCCTAGGACCGATACTTCAACAGATGATACAGAAGATAAAAATCAAAGGCCTGAAAGGGGTGATTCCAGCGAAAGATCAAAAGATAAAGCAGATCAAAAGACATTGCGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCAGGCTGAGGAAAAAGGCATACGTGCAGCAATTAGAGAGCAGTAGACTGAAACTGACCCAACTTGAGCAGGAGTTGCAGCGAGCCCGCCAACAGGGAATATTTATTTCAAGCTCCGGAGATCAGGCCCATTCAATGAGTGGAAATGGTGCAATGGCATTTGATGTAGAGTATGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAGCTAAGGGCTGCGATAAATTCTCATGCTGGAGATATTGAACTTCGTACTATTGTCGAAAATTTCATGACACAGTTTGATGATATCTTCAGGCTGAAAGGTATTGCTGCAAAAGCCGATGTGTTTCACATTTTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATCGGGGGCTTTCGCTCATCTGAGCTTCTCAAACTTCTTGTGAATCAACTGGAGCCATTGACTGAGCAACAATTGATGGGCATCTACAACTTGCAGCAGTCATCTCAGCAGGCTGAAGATGCATTGTCCCAAGGAATGGATGCATTGCAGCAATCACTCGCCGAGACATTGGCTAATGGTTCACCCAGCCCATCAGGCTCCTCGGGAAATGTGGCAAATTATATGGGGCAAATGGCCATGGCCATGGGAAAGCTTGGTACTCTTGAAGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACGCTACAACAAATGCTTCGAATCTTGACAACCAGGCAATCGGCTAGAGCTCTTCTTGCAATAAGTGATTATTTCTCGCGGCTGCGAGCTCTGAGTTCTCTCTGGCTTGCCCGGCCAAGGGAGTGA	1392	0.4605	MGSRGRTVNVSTQDTNNNVVNGMPSYAPPLPSSSTSMGIDATNVLPSRISEFGTLEQSLGFRVEDAINLSRNPVFNQMKSNSQGLGADVHFGALNKSIANSDINLSAAIAGSQTLPLHKDSQPNLASTSGGHRENWGESNMADGSPRTDTSTDDTEDKNQRPERGDSSERSKDKADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVENFMTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE*	464

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev06g1403	463	SUPERFAMILY	Leucine zipper domain	178	221	IPR046347	GO:0003700\|GO:0006355
Aev06g1403	463	Coils	Coil	197	224	-	-
Aev06g1403	463	CDD	bZIP_HBP1b-like	178	230	-	-
Aev06g1403	463	ProSiteProfiles	DOG1 domain profile.	243	460	IPR025422	GO:0006351\|GO:0043565
Aev06g1403	463	PANTHER	TRANSCRIPTION FACTOR TGA9	63	463	-	-
Aev06g1403	463	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	176	220	IPR004827	GO:0003700\|GO:0006355
Aev06g1403	463	Pfam	Seed dormancy control	261	335	IPR025422	GO:0006351\|GO:0043565
Aev06g1403	463	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	181	196	IPR004827	GO:0003700\|GO:0006355
Aev06g1403	463	MobiDBLite	consensus disorder prediction	116	180	-	-
Aev06g1403	463	MobiDBLite	consensus disorder prediction	116	148	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g1403	Aev-Chr6	9747512	9753043	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g1403	141	463	bZIP Transcription Factor Family	AT3G12250	76.133	1.02e-176	496

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Aev06g1403		DOG1	1.6e-29	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g1403	K14431		-	gmx:100780071	775.393

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev06g1403	06	9747512	9753043	Aev06g1403	06	9747512	9753043	ECH

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