Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1395 ATGAAGGTCATTGCTGCGTATTTGCTCGCCGTTTTGGGAGGCAACACTTCCCCTTCAGCTCATGATCTCAAGAACATCCTTTCCTCAGTTGGAGCTGAGGCTGAGGATGACATGGTTGAATTGCTCTTGACTGAAGTAAAGGGCAAGGATATCACTGAGCTAATTGCTAGTGGAAGAGAGAAGTTGGCTTCAGTTCCTTCTGGCGGTGGTGCAGTTGCTGTTGCTGCTGCACCTGCAGGAGGTGCCTCATCCGGTGGTGCCGCACCTGCAGCCGAAGCAAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAGTCAGATGATGATATGGGTTTCAGCTTATTCGAATAG 348 0.5 MKVIAAYLLAVLGGNTSPSAHDLKNILSSVGAEAEDDMVELLLTEVKGKDITELIASGREKLASVPSGGGAVAVAAAPAGGASSGGAAPAAEAKEEKKVEEKEESDDDMGFSLFE* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1395 115 MobiDBLite consensus disorder prediction 91 105 - -
Aev06g1395 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aev06g1395 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aev06g1395 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 115 - -
Aev06g1395 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Aev06g1395 115 MobiDBLite consensus disorder prediction 76 115 - -
Aev06g1395 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aev06g1395 115 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1395 Aev-Chr6 9663244 9664266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1395 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.696 1.29e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1395 K02943 - ming:122089001 132.109