Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1394 ATGTCCCTTGAAGAGTCGCTAAGATCTCTATCGTTGGATTACCTGAACCTGCTGATCAACGGCCAAGCCTTCAGCGACGTAACCTTCAGCGTAGAGGGGCGTCTAGTGCACGCGCACCGCTGCATCCTGGCGGCCCGCAGCCTCTTCTTCAGGAAATTCTTCTGCGGGCCTGACCCGCCTCCTTCTGAGGAGCCCGGCCCGGGCCCGAGGGGGTCGCGAGGGGGGGTGATACCGGTGAACTCGGTGGGGTACGAGGTGTTCCTGCTGATGCTGCAGTTCCTGTACAGCGGGCAGGTGTCGATCGTGCCGCAGAAGCACGAGCCCAGGCCCAATTGCGGTGAGAGAGGGTGCTGGCACACGCATTGCTCCTCAGCCGTTGATCTTGCCCTTGACACCCTCGCTGCCGCTAGATACTTTGGTGTTGAACAGCTTGCTCTCCTTACTCAGAAACAACTAGCGAGTATGGTGGAGAAAGCCTCAATTGAAGATGTAATGAAAGTACTATTAGCTTCAAGAAAGCAAGACATGCAGCAACTATGGACCACTTGCTCCCACCTCGTAGCAAAATCAGGCCTCCCTCCCGAAGTTCTCGCCAAACATCTCCCAATCGACATCGTCGCCAAGATCGAGGAGCTCCGCCTCAAATCCTCCCTCGCCCGCCGCACCCTCCTCCCCCACCACCACCACCCTCACCATCCTCATCACCACCACCACCACCACGACCTCTCGGCCGCCGCGGAGCTAGAGGACCAGAAAATCCGGCGAATGAGGCGGGCCCTCGACTCCTCAGACGTTGAGCTAGTCAAGCTCATGGTCATGGGAGAGGGCCTCAACCTCGACGAGGCTCTCGCCTTGCACTACGCAGTGGAGAATTGTAGTAGAGAAGTGGTGAAGGCCCTGCTGGAACTGGGGGCAGCTGACGTCAACTACCCTGCAGGTCCAGCAGGGAAGACACCACTTCATATCGCGGCAGAAATGGTCTCCCCGGATATGGTGGCAGTCCTGCTGGACCACCACGCGGATCCTAATGTGAGGACGGTGGACAATGTGACGCCGTTGGACACTCTTCGAACCCTAACCTCGGATTTTCTATTCAAAGGGGCAGTGCCAGGACTGACACACATAGAGCCAAACAAGTTGAGGCTTTGTTTGGAGCTTGTTCAATCGGCAGCACTAGTGTTGTCACGTGAAGAAGGGAATGCCAATGCCAATGTAAATGCCAACAGCAACAATGTTGGTTCTTCCATTTACCCTCCTCCTATCAACGAGGATCATCATAGCAGTTCTAGTAGTGGCAACAACAACAACAACAGCGGCAGCGGCAACAACATGGGAAGTAACCTTAACTTGGACTCCAGGTTGGTGTATCTTAACCTTGGTGCCACCGTGGGTGGTGGTTCCGGTCATATGGGTTCGAGAATGGATGGTGGTGATGATGATAACAATAATAGTAGCCGTCATGAATCAACTATGTACCACCACCATCACCATCACTCTCATCATGACTTCTAA 1512 0.5489 MSLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPPSEEPGPGPRGSRGGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMQQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRLKSSLARRTLLPHHHHPHHPHHHHHHHDLSAAAELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDNVTPLDTLRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANANVNANSNNVGSSIYPPPINEDHHSSSSSGNNNNNSGSGNNMGSNLNLDSRLVYLNLGATVGGGSGHMGSRMDGGDDDNNNSSRHESTMYHHHHHHSHHDF* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1394 503 Pfam Ankyrin repeats (3 copies) 263 345 IPR002110 GO:0005515
Aev06g1394 503 MobiDBLite consensus disorder prediction 467 503 - -
Aev06g1394 503 PANTHER REGULATORY PROTEIN NPR5 1 496 - -
Aev06g1394 503 SMART ANK_2a 315 344 IPR002110 GO:0005515
Aev06g1394 503 SMART ANK_2a 280 310 IPR002110 GO:0005515
Aev06g1394 503 Pfam Domain of unknown function (DUF3420) 191 257 IPR024228 -
Aev06g1394 503 Gene3D - 237 363 IPR036770 -
Aev06g1394 503 ProSiteProfiles Ankyrin repeat profile. 315 347 IPR002110 GO:0005515
Aev06g1394 503 Gene3D Potassium Channel Kv1.1; Chain A 3 189 IPR011333 -
Aev06g1394 503 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 496 IPR044284 GO:0099402
Aev06g1394 503 SUPERFAMILY Ankyrin repeat 274 357 IPR036770 -
Aev06g1394 503 CDD BTB_POZ_NPR_plant 8 156 - -
Aev06g1394 503 MobiDBLite consensus disorder prediction 473 489 - -
Aev06g1394 503 Pfam BTB/POZ domain 16 106 IPR000210 GO:0005515
Aev06g1394 503 SUPERFAMILY POZ domain 9 154 IPR011333 -
Aev06g1394 503 SMART BTB_4 25 156 IPR000210 GO:0005515
Aev06g1394 503 MobiDBLite consensus disorder prediction 402 446 - -
Aev06g1394 503 ProSiteProfiles BTB domain profile. 25 103 IPR000210 GO:0005515
Aev06g1394 503 ProSiteProfiles Ankyrin repeat region circular profile. 315 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1394 Aev-Chr6 9616168 9618875 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev06g1394 BTB 1.1e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1394 K14508 - qsu:112012060 695.271