Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1375 ATGCTTGCATTGTCCCCTTCTACTGTGTTCTCTACAATGGGATGGCCCTTAGAAGTTGAGCCTACTATAAGTCATAACAACAACAACAATTACTTGAATTGCTCAGAGTACCCTTTTCCTCCAAATCAAGTATTATTATTGTCTTCACCACAATCGGAAATTGAAAGGTGTACGACTACATCATCACCGGAACAAGACCCTTTCATGGTGAAGAAGATGAATCACAATGCTAGTGAGCGTGATCGCCGCAAGAGGATCAATGCCTTGTATTCCTCTCTTCGTTCACTCCTCCCTCTGCCTCATCAAACGAAAAAAATGAGCATTCCAACAACAATTTCACGAGTCCTGAAATACATACCAGAGTTACAGAAACAAGTGGAAACACTAACAAAGAAAAAGGAGGAGCTGTTATTAAGAATCTCAAGGCAAGGTGGTGGTGGTGATGATGCAGTGATGAGCAAAGAAAGGAAGAAGATTTGCCATCATCACAACTCTGCTTTTGTAGTCTCAACAAGTAGGCTCACTGAAACTGAGGCTTCTATTCAGATTTCCACATATGAGGCTCTCAACAACTCTCCTCTGCTCTCTCAGATCTTGTTTTGTTTAGAAAACTATGGCCTTTCACTTCTTAATGCTTCTTCCTTTGACACCTTTGGAGGAAGGGTCTTCTATAACTTGCATTTCAAGGTGGAAAAAAGTCAGAGATTAGAGGCAGAGGTTTTAGCTGAGAAGCTTTTGTCAGTATATGAGAAGCAGCAAAGGATTTTCTAA 771 0.4086 MLALSPSTVFSTMGWPLEVEPTISHNNNNNYLNCSEYPFPPNQVLLLSSPQSEIERCTTTSSPEQDPFMVKKMNHNASERDRRKRINALYSSLRSLLPLPHQTKKMSIPTTISRVLKYIPELQKQVETLTKKKEELLLRISRQGGGGDDAVMSKERKKICHHHNSAFVVSTSRLTETEASIQISTYEALNNSPLLSQILFCLENYGLSLLNASSFDTFGGRVFYNLHFKVEKSQRLEAEVLAEKLLSVYEKQQRIF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1375 256 SMART finulus 76 128 IPR011598 GO:0046983
Aev06g1375 256 Gene3D - 65 143 IPR036638 GO:0046983
Aev06g1375 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Aev06g1375 256 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 251 IPR015660 GO:0003700|GO:0006357
Aev06g1375 256 CDD bHLH_AtORG2_like 71 143 - -
Aev06g1375 256 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Aev06g1375 256 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 251 - -
Aev06g1375 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 140 IPR036638 GO:0046983
Aev06g1375 256 Coils Coil 119 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1375 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 39.615 5.30e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1375 HLH 2.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1375 - - gmx:100803424 255.758