Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1356 ATGGCGCCAAAACCAAAACCTTCGTCTCCAATCTCCATTGGTAACTGCGAGATCATTGTCGATGCCAAAAATTTCACCTGCAAATCCGATCAAAACGGCACCGTAATCTCTTTCCCCAGAAACGGGAAAGTCATTGTATCAGTGGCACAAGACGTATCTGCAAACCTTATAAATGCTTCTGATAATTTATACTCCGATGATAGAGAGCACGAGTTCATGCTTGTTAGTCCTAAAGATGATGATGAAATCAACAAATCATTGTTGCAGGAGGTGTTACAGATGTATATGACAGAGCTACCTGGAATGAATTATGCTGCTAATACAGGAAAGAAATCGAAGTTTCTTGAAAGATGTGTGACTAATGGGAAGTATCGTACACTACTTCTAAAATCTTGTTCTGTTGGAAATTCTGTAAAGGTTATAGCTGCAATTACATATCAAATCATTCCTGCTGATACAGAATATGCTGAGATCCCACTTGCAGCTGTCAGTACAATTTATCACAGGAAGGGTTTGGGTCGTCTGTTGTATGAAGAGCTACAGAAGAGACTTCAAAGTATTGGCATTCGTTCTATTTTCTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATAGCACAAGTGGATGTGAAAGGTACTAGAGCCCGCAAATTACCCGTAAAAGCTGGTATTCGCAAATCATTATGCTTTCCTGGCGGTTCAACTCTCATGGTTTGCCATCTAAGGAAGGAATTCTTAGCTGATGCTGCTAACTCTATGAAGTGTCTCCCATCACCGCTTCATCAGAATCCCTCGACATCTGCCATTGAAGAAAGCAAGTGGCTTGTACCTTTAGGAGAGTTACACATTGATTTGAACTTTACAAATTTATCATCTGACAGAACAGAAAATACAGATAAAAGTCAAGCTGAAGCTTTGATGAAAGATGGATCTTCAAGAGAATATGACAAACTCAACGGAACAGAAAATCACAATCCTGAGCATTACTGCAGTGACATTGTTCCTTTTGCCAGAGGAAATGCTGACAGACTGGACTCTATTGCAGAATGTTCACAAGATGGTATTGATGATAATGTGAAGCTTTGTTTTCAATCTACAAAAGGTTCAAAAAGGGCCTGGGAAGCCTCTACATCCTCGTTGAAGTCAAAAAGAGTGAAGGGAAGCCAGTTGGTTGACTACCGATCTGACTCTAGCTGGGGTTTTACATCAGAGGATGATAGGTCCAATCCTTGTTTTATGGAAGTCCCTCATGTTGATCCTCTGAGTGCAAATAATTCTGAAAAATGTATGGGAGACCGTATGCAATCAGAAGCTCCCATCAACAAGGGACTGCTATCAACCAAACAATGCTTCAGAATCATGTTGATGAATATTGCTGATGATATCAAGAGAACACAGCTTTCAAAGGTGATTGAAGACCTTGGTGGAACTGTAGCCAACGATGGAAGAATGGCCACACATGTTGTCACAGGAAAAGTGAGAAAAACTCTGAATTTCTGCACCGCTCTCTGTTCTGGGGCTTGGGTGATCTCATCAAGTTGGTTAAAAGAAAGTTTCCGCGAAGGCAGATTTGTTGATGAGTTGCCCCACATACTGAATGATAATGATTATCTGTTGAAGTACAAATCTGATTTAAAAAGTGCAGTTTTCCTAGCAAAATCTAGCCCCAATAATTTGTTTAAGGGGTATAATATATGCATTGCAGCTCATGTTCCAACTCCTGCTGAAACTATCTCTGCCATTGTCAAGTCTGCTGGTGGTAATGTTATTAGTGAGATAGAGAAAGTAAAAGAAGCATCAAGTACAATATTTGTGACATGCGAAGAAGATATAGAAGAAGCAATGATGGCTGCAAAGAAAGGGATTCGGACTTTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACTTGGAAGCCTCCCAATTCGTGGAGTCCTTGTAA 1974 0.4022 MAPKPKPSSPISIGNCEIIVDAKNFTCKSDQNGTVISFPRNGKVIVSVAQDVSANLINASDNLYSDDREHEFMLVSPKDDDEINKSLLQEVLQMYMTELPGMNYAANTGKKSKFLERCVTNGKYRTLLLKSCSVGNSVKVIAAITYQIIPADTEYAEIPLAAVSTIYHRKGLGRLLYEELQKRLQSIGIRSIFCWGDKESEGFWLKQGFISIAQVDVKGTRARKLPVKAGIRKSLCFPGGSTLMVCHLRKEFLADAANSMKCLPSPLHQNPSTSAIEESKWLVPLGELHIDLNFTNLSSDRTENTDKSQAEALMKDGSSREYDKLNGTENHNPEHYCSDIVPFARGNADRLDSIAECSQDGIDDNVKLCFQSTKGSKRAWEASTSSLKSKRVKGSQLVDYRSDSSWGFTSEDDRSNPCFMEVPHVDPLSANNSEKCMGDRMQSEAPINKGLLSTKQCFRIMLMNIADDIKRTQLSKVIEDLGGTVANDGRMATHVVTGKVRKTLNFCTALCSGAWVISSSWLKESFREGRFVDELPHILNDNDYLLKYKSDLKSAVFLAKSSPNNLFKGYNICIAAHVPTPAETISAIVKSAGGNVISEIEKVKEASSTIFVTCEEDIEEAMMAAKKGIRTFSSEWFMNCVMRQELDLEASQFVESL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1356 657 Pfam Acetyltransferase (GNAT) family 138 209 IPR000182 GO:0016407
Aev06g1356 657 ProSiteProfiles BRCT domain profile. 460 539 IPR001357 -
Aev06g1356 657 CDD BRCT_PAXIP1_rpt6_like 566 647 - -
Aev06g1356 657 SMART BRCT_7 564 644 IPR001357 -
Aev06g1356 657 SMART BRCT_7 449 529 IPR001357 -
Aev06g1356 657 Gene3D - 69 224 - -
Aev06g1356 657 CDD NAT_SF 139 195 - -
Aev06g1356 657 ProSiteProfiles BRCT domain profile. 562 646 IPR001357 -
Aev06g1356 657 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 4 657 - -
Aev06g1356 657 PANTHER N-ACETYLTRANSFERASE 4 657 - -
Aev06g1356 657 SUPERFAMILY BRCT domain 459 542 IPR036420 -
Aev06g1356 657 Pfam BRCA1 C Terminus (BRCT) domain 466 526 IPR001357 -
Aev06g1356 657 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 139 216 IPR016181 -
Aev06g1356 657 SUPERFAMILY BRCT domain 562 646 IPR036420 -
Aev06g1356 657 Gene3D BRCT domain 564 656 IPR036420 -
Aev06g1356 657 Gene3D BRCT domain 448 563 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aev06g1356 BRCT 3.5e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1356 - - aip:107645523 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1356 06 9292145 9297351 Aev06g1356 06 9292145 9297351 ECH