Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1339 ATGGCGAGGGTGAGAAACCTGAGGAAGGGTCTCAAAGCCATTGAAGATTTGGAACTCCTCAAGCTCTTCAAATCTGAGATTAATTTTGAGCTTTCTTCCAATCCCTTTCAGGGTGTTGAAAGTGGTTCCTTGGGGGATTTTGTGGTGGACTATGATTCGCCACGGTCCAAAGATGTTGTTTTTCGTAGGAAATTCGATTCAGGAGAGGAAGTAGCTGTTTCTGCTCTATTGGGTCATCCTGAATATGAAAAGGAACTTGTTTTCGCAAGGGATGTTTTCATGAAAGTGTGTGTGAAGAAACCCTCTTTCAACCCCATCTTGCAGTTTGATTGCAAGGTTTTTGAGGACACTAATAAAGGCTCTGACTTCAACATCATTAAGGCTAATTATCTTACATCATCTTCATTTTTGAGTCCTTCCATTTACAAAGGCCCCTCATTCAGGCTTCAAATCAAGGTCTCTTTGCCTGACTATCCTCGCGGGGCAACGATGGAGAGCCTCCTCAAGGACTTCGAACTGGAGCCCAAAAATCCCTCTCCCGAAGCCCTCCGCCGCTGGAGAACCGCCGTCAGCTTCGTCGTTAAGAATCGCCGCCGCCGCTTCCGCATGGTCGCCGATCTCGACAAACGTTCCGAAGCTGAGCAAATTAAGCAGGGAATCAAGGAAAAAATTCGGATCGCTCTCTATGTTCAAAAGGCAGCATTGCATTTCATTGATGCTGGAACTCGAGTAGAGTACAAACTACCAGAAGAGGCGAGAGAAGCCGGTTTTGGTATTCATCCTGATGAGATTGCCTCTGTTGTTCGTAGCCATGATTATAAGAGCTTGGTTCATTTTGGTGGAGTTGAATCCATCGCAAGGAAACTTACAACCTCAGTGGATGAAGGTATCAGTGAAGAGAGTATAAATCGCAGACAAAAGGTTTATGGAGTCAACCGATATACAGAGAAACCTTCTAGAAGCTTCTTGATGTTTGTGTGGGATGCACTGCAGGACTTAACTCTAATCATTCTTATGGTCTGTGCTGTAGTTTCAATTGGTGTAGGCATTGCTACTGAAGGGTTCCCGAAAGGAACATATGATGGAGTTGGAATTATACTTAGTATATTCTTGGTTGTCACTGTTACTGCTGTCAGTGACTACCAGCAATCCCTGCAGTTCAGAGATTTGGACAAAGAGAAGAAGAAGATCTTTCTACATGTTACTAGGGACGGGAAAAGACAGAAGATCTCAATTTATGATATTGTAGTTGGTGATGTTGTTCATTTATCAACTGGTGATCAAGTTCCGGCTGACGGGCTTTACATATCTGGATACTTTTTGCTTATAGATGAATCTAGTTTGTCAGGTGAGAGCGAGCCTGTGAATGTAAACGAGGAAAAACCTTTTCTCCTCTCAGGAACCAAAGTGCAGGATGGCCAGGGTAAAATGCTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACGCCATTGCAGGTGAAACTGAATGGAGTTGCAACAATTATCGGTAAAATCGGTTTAGGCTTTGCCTGTCTGACATTTTTGGTGTTGACAGTTAGGTTTTTAGTTGAAAAGGCACTTAGTGGCGAGTTTAGTAGTTGGTCTTCAAATGATGCATTGAAGCTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTAGTTGCGGTTCCCGAAGGATTGCCGTTGGCTGTGACACTTAGTCTTGCCTTCGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGGCATCTCTCTGCTTGTGAGACTATGGGTTCAAGTAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACCATATGGTTGTAAACAAACTTTGGATATGCGAAAAAGCCACAGAGATCAAAGGTAATGAGAGTGCAGAAGAACTGAAAACATCTTTATCTGATGAAGTTCTGAGCATCCTTTATCGAGCTATATTTCAAAACACTTCTGCTGAAGTAGTTAAGGGTAAAGATGGAAAGGACACCATATTGGGAACTCCAACAGAATCAGCAATTCTGGAGTTTGGCTTGCATTTGGGTGCTGATTTTGACGCCCAGCGTAGAGCATACAAGATACTCAAGGTTGAGCCTTTCAATTCTGTGAGGAAGAAGATGTCTGTGCTTGTGCGTCTTCCTGGTGGAGGTTTCCAAGCTTTCTGCAAAGGCGCATCAGAAATAATACTAAAAATGTGCGACAAAATTATCGATAGCAATGGAGAAGTTGTAGACCTTCCTCAAGACAGGGCAAATAATGTCACCAATGTTATAAATGGATTTGCCTCTAAAGCTTTGAGAACTCTTTGTTTAGCTGTCAAAGATATAAATGAAACTGGTGGGGAAATTAACATCCCTGATAGTGGCTATACTCTGATAGCCATCATAGGAATCAAGGATCCGGTACGCCCCGGAGTAAAGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACTGTCCGCATGGTCACTGGTGATAACATTCATACGGCAAGAGCTATAGCTAAAGAATGTGGTATACTTACAGATGGTGGCATAGCCATCGAAGGACCAGATTTTCGTAACTTGACTGAGAGTCAAATGAAGGATATCATACCAAGAATCCAGGTGATGGCACGATCATTACCGCTCGATAAGCACAAATTAGTGACCAATTTGAGGAGTACATTTGACGAGGTTGTAGCTGTAACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGACTTGCTATGGGCATAGCTGGAACAGAGGTTGCGAAAGAAAATGCTGATGTCATTATAATGGATGATAATTTCGCGACTATTGTTAATGTAGCAAAATGGGGACGGGCAGTATACATAAACATTCAAAAATTTGTGCAGTTCCAGTTAACTGTTAATATTGTTGCTCTGATTATCAACTTTGTTTCAGCATGCATCACTGGATCTGCTCCACTCACTGCTGTGCAGTTGCTCTGGGTCAACTTGATTATGGACACACTGGGTGCATTAGCCCTTGCAACTGAACCACCTAACGATGGACTTATGCAAAGACCCCCAGTTGGAAAAGGAGCAAGCTTTATAACCAAACCTATGTGGAGGAATATCATTGGTCAAAGTATATATCAATTGATTGTCCTAGCAATTCTAAATTTTGATGGGCTGAGGCTACTCAAAATCAGTGGTCCGAATTCTACTAAAGTACTCAACACTCTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTCAATGAGATAAACAGCAGAGATATCGAAAAGATAAACGTATTCAGGGGCATGTTTAGCAGCTGGATGTTCTTGTTGATAATCTTCGCCACAGTGGCGTTTCAAGTGGTGATAGTTGAGTTCCTGGGAACGTTTGCCAGCACTGTGCCTCTAAACTGGCAGTTCTGGTTACTCAGTGTCTTAACTGGTGCTGTTAGCATGCCTCTAGCTGCTATACTCAAGTGCATACCAGTAGAAAAAGTTACCAAAATTGAGCATCATGATGGTTATGAGGCACTTCCTTCTGGTCCTGAGCAAGCATAA 3594 0.4265 MARVRNLRKGLKAIEDLELLKLFKSEINFELSSNPFQGVESGSLGDFVVDYDSPRSKDVVFRRKFDSGEEVAVSALLGHPEYEKELVFARDVFMKVCVKKPSFNPILQFDCKVFEDTNKGSDFNIIKANYLTSSSFLSPSIYKGPSFRLQIKVSLPDYPRGATMESLLKDFELEPKNPSPEALRRWRTAVSFVVKNRRRRFRMVADLDKRSEAEQIKQGIKEKIRIALYVQKAALHFIDAGTRVEYKLPEEAREAGFGIHPDEIASVVRSHDYKSLVHFGGVESIARKLTTSVDEGISEESINRRQKVYGVNRYTEKPSRSFLMFVWDALQDLTLIILMVCAVVSIGVGIATEGFPKGTYDGVGIILSIFLVVTVTAVSDYQQSLQFRDLDKEKKKIFLHVTRDGKRQKISIYDIVVGDVVHLSTGDQVPADGLYISGYFLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATIIGKIGLGFACLTFLVLTVRFLVEKALSGEFSSWSSNDALKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSSSCICTDKTGTLTTNHMVVNKLWICEKATEIKGNESAEELKTSLSDEVLSILYRAIFQNTSAEVVKGKDGKDTILGTPTESAILEFGLHLGADFDAQRRAYKILKVEPFNSVRKKMSVLVRLPGGGFQAFCKGASEIILKMCDKIIDSNGEVVDLPQDRANNVTNVINGFASKALRTLCLAVKDINETGGEINIPDSGYTLIAIIGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNIHTARAIAKECGILTDGGIAIEGPDFRNLTESQMKDIIPRIQVMARSLPLDKHKLVTNLRSTFDEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMQRPPVGKGASFITKPMWRNIIGQSIYQLIVLAILNFDGLRLLKISGPNSTKVLNTLIFNSFVFCQVFNEINSRDIEKINVFRGMFSSWMFLLIIFATVAFQVVIVEFLGTFASTVPLNWQFWLLSVLTGAVSMPLAAILKCIPVEKVTKIEHHDGYEALPSGPEQA* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1339 1197 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 271 1176 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aev06g1339 1197 Pfam Cation transporter/ATPase, N-terminus 278 345 IPR004014 -
Aev06g1339 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 619 823 IPR023299 GO:0000166
Aev06g1339 1197 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 365 638 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev06g1339 1197 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 881 1002 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev06g1339 1197 Gene3D - 328 1173 - -
Aev06g1339 1197 Gene3D - 610 959 IPR023214 -
Aev06g1339 1197 Gene3D - 623 818 IPR023299 GO:0000166
Aev06g1339 1197 CDD P-type_ATPase_Ca_PMCA-like 302 1047 - -
Aev06g1339 1197 Pfam Cation transporting ATPase, C-terminus 999 1172 IPR006068 -
Aev06g1339 1197 Gene3D Mitochondrial glycoprotein 14 153 IPR036561 -
Aev06g1339 1197 SUPERFAMILY Calcium ATPase, transduction domain A 398 494 IPR008250 -
Aev06g1339 1197 Pfam E1-E2 ATPase 399 591 - -
Aev06g1339 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 615 621 IPR018303 -
Aev06g1339 1197 SFLD Haloacid Dehalogenase 595 966 - -
Aev06g1339 1197 PANTHER CALCIUM-TRANSPORTING ATPASE 169 1182 - -
Aev06g1339 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 278 1175 IPR023298 -
Aev06g1339 1197 SUPERFAMILY HAD-like 612 1019 IPR036412 -
Aev06g1339 1197 Pfam Cation transport ATPase (P-type) 669 753 - -
Aev06g1339 1197 PANTHER CATION TRANSPORTING ATPASE 169 1182 - -
Aev06g1339 1197 Gene3D - 178 240 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 833 843 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 938 950 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 613 627 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 811 822 - -
Aev06g1339 1197 PRINTS P-type cation-transporting ATPase superfamily signature 914 933 - -
Aev06g1339 1197 SFLD p-type atpase 595 966 IPR044492 -
Aev06g1339 1197 PRINTS H+-transporting ATPase (proton pump) signature 914 930 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev06g1339 1197 PRINTS H+-transporting ATPase (proton pump) signature 771 789 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev06g1339 1197 PRINTS H+-transporting ATPase (proton pump) signature 946 971 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev06g1339 1197 SMART Cation_ATPase_N_a_2 278 350 IPR004014 -
Aev06g1339 1197 Gene3D - 296 496 - -
Aev06g1339 1197 Pfam Ca2+-ATPase N terminal autoinhibitory domain 168 212 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1339 Aev-Chr6 9102416 9117617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1339 220 1197 Primary Pumps ATPases AT3G57330 74.233 0.0 1503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1339 K01537 - gmx:100783489 1719.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1339 06 9102416 9117617 Aev06g1339 06 9102416 9117617 ECH
Aev06g1339 06 9102416 9117617 Aev02g1496 02 16620268 16635846 PCT