Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1325 ATGGGTGACAATACTAATGGTGAGATTTTTCCATACGAGGATGTGATCATCGAGATACTGAAGAGGCTTCCCGTGAAATCCTTGATCCGATTCAACTCTGTCTCCAAAGATTGGTCCAAACTATTGAGAACCCCTCATTTCATCGCACATCACCTTCACCAATCTCTTCACAGCCCTTTTCTTCTTCTCCAACGACTTCCTCATCGATTTCCTCCTTCCGCTTCTTCCTCCTTCTGTTTGATTGCACCAGACCTCAATCTTCACAACCCTCGATTCCTCGATTTCACCCCCAATGTTGCCAATCTTGTCGGTTCATGCGATGGCTTGTTGTGCTTACGACATACTGATTCTACCCTTTCAATCTGTAACCCTGCCACCAGGCGATTCAGACAGGTACCTCCAACCCTAATTGATTCCGACGATTTTTACTATCTTGGATTTGGGTTTAGTCCAATTGTCCATGATTACAAGATAGTGAGAGTTTCTGTTTGCGAGTCCGATAAAGATGAGGGTGATTCTCAGATTGTGGTTCCTGATAAGGTTCATGTTCACCGAGTGGAAGTGTATTCCTTAGCTACTGGTTCCTGGAGAGAGATTGATGCTAGCAATCTGCAGAATTTGTGCCCGGTTTCGAATTCTGTTGCTGCCGATGGAGCTCTGTTTTGGAAAGCAACCATGACCTCTGATTTTGATTCTGATGAATTTGTGGTTTCATTCGATATTGGGCGCGAAGTGTTCACTCGATTGAAAGGTCCTCCAGCACCCTGTTCAGCCACTTCTGAGTCCTGCAGTAACGTTCTTGCAGTGCATAACCATAAACTCGCAATGTTTCATCATTTTGTGATAGGGAACTTCCAAGGTTCTTCGATGGACTTGTGGGTATTGGATAACACTGATACATGTGCATCAGAGGGGGAGAGATGGATTAAACAGTACAGTGTTGGACCCTTCTCAAGGATGATATATCCACAGAGTATATGGAGAGATGAAATTGTGTGTCGGGAAGAATTGTGTGGGCACAACGATGAATCTGGCCGAGTGGAAACTGCTCTTTCGGTCTTGAATCCTTGCAGTAATGAGTTGAAGAATCTGGCAGCGCATAGAAATGAGCATTGTTATGTTGCTTTCAATTATGCAGAAAGCCTTGTTCAACTGCCTAACATTCAGCTTCAACAGTAG 1179 0.4427 MGDNTNGEIFPYEDVIIEILKRLPVKSLIRFNSVSKDWSKLLRTPHFIAHHLHQSLHSPFLLLQRLPHRFPPSASSSFCLIAPDLNLHNPRFLDFTPNVANLVGSCDGLLCLRHTDSTLSICNPATRRFRQVPPTLIDSDDFYYLGFGFSPIVHDYKIVRVSVCESDKDEGDSQIVVPDKVHVHRVEVYSLATGSWREIDASNLQNLCPVSNSVAADGALFWKATMTSDFDSDEFVVSFDIGREVFTRLKGPPAPCSATSESCSNVLAVHNHKLAMFHHFVIGNFQGSSMDLWVLDNTDTCASEGERWIKQYSVGPFSRMIYPQSIWRDEIVCREELCGHNDESGRVETALSVLNPCSNELKNLAAHRNEHCYVAFNYAESLVQLPNIQLQQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1325 392 PANTHER OS09G0372900 PROTEIN-RELATED 14 384 - -
Aev06g1325 392 Pfam F-box domain 13 45 IPR001810 GO:0005515
Aev06g1325 392 Gene3D - 11 47 - -
Aev06g1325 392 SUPERFAMILY F-box domain 10 75 IPR036047 GO:0005515
Aev06g1325 392 TIGRFAM F_box_assoc_1: F-box protein interaction domain 104 321 IPR017451 -
Aev06g1325 392 Pfam F-box associated domain 215 312 IPR013187 -
Aev06g1325 392 PANTHER F-BOX PROTEIN CPR30-LIKE 14 384 - -
Aev06g1325 392 SUPERFAMILY Galactose oxidase, central domain 107 320 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1325 Aev-Chr6 8983675 8984853 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1325 184 297 Carbohydrate Esterase AT1G25141 29.565 2.90e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1325 - - ahf:112733217 457.988