Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1321 ATGTTCTGTTCACAGACCTGGCTGCCGCTACACCTTCTTCTTCCGTTCCCTTCGTTGTTGGGTTTTGTGGATTCTCATCTCACTTTCTCAGCTCTTTATTTCTGGTCCAATTTATCTATTTTCCAAGATTTTGCTGCATTAATTAGAAAAAACAATTCAAGTATATTTATATATATATATATATATATATATACTGTACGGCTAATAAACAAGATGGCGACACCGCCGCCGCCGCCGGCCATGGGGCCGCCACCGGGAGGAAACCCGGTGTTTGAGGGAGGTATGCCAGCAGCGCCGCCTACTCCGGGGACGGACATGACGGGAATATGCTTCAGAGACCAGCTTTGGCTGAACACGTATCCGCTGGATCGGAACTTAGTGTTCGACTACTTCGCTTTGTCGCCGTTCTACGACTGGAGCTGCAACAACGAGCAGCTTCGGATGCGCTCTGTTCACCCTCTCGACATCTCTCAACTCTCGAAAATGACAGGTGTAGAGTATATGCTCAGTGAAGTTCAAGAGCCTCATCTTTTCATTATTCGCAAGCAAAAGAGAGATAGCCCTGAGAAAGTTACACCGATGCTGGCGTATTACATCTTGGATGGTTCGATTTACCAGGCACCACAGCTATGCAACGTTTTTGCTGCTCGAATTGGAAGGGCACTCTATTACATACAAAAGGCCTTCACTACAGCTGCCTCAAAGTTGGAGAAGATAGGATTTGTTGATTCGGAAAATGAGACTGCTGTGACGGAATCAAAAGTTGCTAAGGAGACAATTGATTTAAAGGAAGTTAAGCGTGTGGATCATATTCTTGCATCCCTACAACGCAAGTTACCACCAGCTCCACCTCCACCTCCATTTCCAGAAGGATATGTTCCACCTTCAACAGGGGAAGGTGACAAAGCCTCTGAAGTTAACGAATCATCTGAGATGCAAGCTCCTCAGGTTGATCCCATCATTGATCAAGGACCTTCAAAAAGAATGAAGTTGATGTAG 999 0.4575 MFCSQTWLPLHLLLPFPSLLGFVDSHLTFSALYFWSNLSIFQDFAALIRKNNSSIFIYIYIYIYTVRLINKMATPPPPPAMGPPPGGNPVFEGGMPAAPPTPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRMRSVHPLDISQLSKMTGVEYMLSEVQEPHLFIIRKQKRDSPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGFVDSENETAVTESKVAKETIDLKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTGEGDKASEVNESSEMQAPQVDPIIDQGPSKRMKLM* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1321 332 Gene3D Mediator complex, subunit Med6 102 232 IPR038566 -
Aev06g1321 332 Pfam MED6 mediator sub complex component 109 234 IPR007018 GO:0003712|GO:0006357|GO:0016592
Aev06g1321 332 MobiDBLite consensus disorder prediction 278 293 - -
Aev06g1321 332 MobiDBLite consensus disorder prediction 277 332 - -
Aev06g1321 332 PANTHER MED-6-RELATED 92 330 IPR007018 GO:0003712|GO:0006357|GO:0016592
Aev06g1321 332 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 92 330 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Aev06g1321 Med6 6.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1321 K15128 - csin:114262897 411.379