Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1320 ATGGAGAGTGAGAAAGGGTTATTGGAATGTGCAAGGAAGTGCTCTCCACCACCTTTCTTGTTGAAGACATACATGCTCGTGGAGGATCCCGCCACCCACAACATCGTCTCATGGAATGCCCATGGGACGGCGTTCGTCGTGTGGCGGCCGGTGGAATTCGCCCGTGATCTCCTCCCTACTCTCTTCAAGCATAGCAACTTCTCTAGCTTTGTCCGCCAGCTCAACACCTATGGTTTTCGGAAAGTTGCAACAAGCAGATGGGAATTCTGCAATGAAAGGTTTAGGAAGGGAGAGAGAGAACTCTTAGGAGAAATTAGAAGAAGAAAAGCTTGGACAAGGAAGCAACAACCAAATACTACTAGTGCCACAGTTTTACCAAACCAAGTCGCAATACAACAAGACTCTGACGAGGACCAAAGGTCCTCGTCGACCTCGTCATCTTCCGGTTACACCACTCTTGTTGATGAGAACAAGCGGCTCAAGAAGGAGAATGGGGTGTTGAGCCATGAGCTCACAACCATGAAGAGAAAATGTAGGGAACTGCTCGATTTAGTCGCGAAATATTCACGCAAGAAGGAAGAGGAGGAGGATGGAAGGCCAATGCTATTTGGGGTGAGATTGGAAGTTCAAGGAGAGAGGAAGATGAAGAGAAAGAGCATTTTGCTTTCTCAGTCATGCAAATAG 684 0.4766 MESEKGLLECARKCSPPPFLLKTYMLVEDPATHNIVSWNAHGTAFVVWRPVEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFRKGERELLGEIRRRKAWTRKQQPNTTSATVLPNQVAIQQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVLSHELTTMKRKCRELLDLVAKYSRKKEEEEDGRPMLFGVRLEVQGERKMKRKSILLSQSCK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1320 227 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Aev06g1320 227 Gene3D - 11 109 IPR036388 -
Aev06g1320 227 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 4 226 - -
Aev06g1320 227 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g1320 227 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 226 IPR027725 -
Aev06g1320 227 MobiDBLite consensus disorder prediction 113 155 - -
Aev06g1320 227 MobiDBLite consensus disorder prediction 114 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1320 Aev-Chr6 8935174 8937328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1320 16 208 HSF AT2G41690 54.976 4.11e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev06g1320 HSF_DNA-bind 2.8e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1320 K09419 - gmx:100802739 325.094