Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1313 ATGGGTGATCGTTGTGATTCAAACATTAATTTTAATTCTAGTGGGTGTGAAGAAAACTTGACCTCTCTTTCACCTGAACCTGAAGACTGCAAGCCTGTGATTCATGGTTTTAATGAAAAAGAAGCTTTCCCTGTGCCGCGGGCTGGGATGGTATTTAGTTCAGAGGATGAGGTGAGATTGTATTACAAAAAATATGCCATTCGAGAAGGTTTCCGCTTCATGACTAGATCCTCAAAGAAGGGAAATGATGGTAGAGTTAAATATTTAACACTTGCATGTTCCAGAGAAGGGGTTAGAAGAGCATGTAAAGGAATGAGAATTAGTTCATCAAGGAAACAGAAATGTAAAGCCAAGATCTGTGTGTCTTTCTGTAAAGACGGTACTTACCAGGTCATTGAGGATGTGCTAATAAGGGATGAGCCTAAGGAAACCGTAGTTGAAGTCACATTTGACAGGGTGAATCGCGACGTGAAGTGCAGTTGCTGCTTGTTTGAGTTCAAAGGGATACTTTGTAGGCACTCACTCGCCATACTAGCACAAGAACGAGTGAAAGAAGCCCCATCTAAATACATCGTAGATAGGTGGAGAAAAGATGTAGAGAGGAAGTATGTATATAGCAAAACCAGTTATGGTGTTCAACATCATAAGCCTAAGATGCAAAGGCTTGAATTGTTATGCAACCAATTCAAGAGTGTTGCTGATGTTGCAGCTGAATTTGAGGAAACAAGTTGTTTTGTAAAGGATACACTGTGTAACTTGAAGGAGAAGATTCAAGTTGCATGGGCATCCCATTTGAGAAACTCATCTCAGGACACAGGCTTCGTGCTTGGTGTTGAGGATGCAATTATATAA 852 0.4061 MGDRCDSNINFNSSGCEENLTSLSPEPEDCKPVIHGFNEKEAFPVPRAGMVFSSEDEVRLYYKKYAIREGFRFMTRSSKKGNDGRVKYLTLACSREGVRRACKGMRISSSRKQKCKAKICVSFCKDGTYQVIEDVLIRDEPKETVVEVTFDRVNRDVKCSCCLFEFKGILCRHSLAILAQERVKEAPSKYIVDRWRKDVERKYVYSKTSYGVQHHKPKMQRLELLCNQFKSVADVAAEFEETSCFVKDTLCNLKEKIQVAWASHLRNSSQDTGFVLGVEDAII* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1313 283 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 130 272 IPR031052 GO:0006355
Aev06g1313 283 Pfam SWIM zinc finger 157 178 IPR007527 GO:0008270
Aev06g1313 283 ProSiteProfiles Zinc finger SWIM-type profile. 144 182 IPR007527 GO:0008270
Aev06g1313 283 PANTHER OS03G0843700 PROTEIN 12 136 - -
Aev06g1313 283 SMART 26again6 157 184 IPR006564 GO:0008270
Aev06g1313 283 Pfam FAR1 DNA-binding domain 61 133 IPR004330 -
Aev06g1313 283 PANTHER OS03G0843700 PROTEIN 130 272 - -
Aev06g1313 283 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 136 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1313 Aev-Chr6 8842508 8844505 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev06g1313 FAR1 1.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1313 - K17604 gmx:102663358 214.542