Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1306 ATGGGGACTCCTGAATTCCCAGATCTAGGCAAGCATTGTTCCTTTTCTGATTGCAACCTTATCGATTTCTTGCCCTTCTCTTGCGATCGCTGCAATCAGGTGTATTGTTTGGAGCACCGAAGTTATATTAAGCATAAGTGTACAAAAGGCAACAAAAATGATGTCACTGTTGTTATATGTCCACTTTGCGCAAAAGGAGTTCGCCTGATTCATGATCAAGATCCAAACATAACTTGGGAGAATCATGTTAACATTGACTGTGACCCTTCAAATTATGAGAAAGCTACAAAGAAGAAAAAATGCCCTGCCCCTGGATGCAGAGAGATCTTAGTATTCTCTAACACAATCAAGTGCAGGGACTGCATGGTAGACCATTGTTTGAAGCACCGGTTTGGACCCGATCACAAATGTCCTGGTCCCAAAGTGGTGGATACAAGTTTCTCATTCATGAATCTTGTGAGTAGGAGTAGAAAAGAGGAGCCAAAACCCAATTCGACTTCAACCTCTACCTCATCATCCAGATGGACTAGCCTTCTTAACATGGCTTCTAACATTCGAGCTTCAGCTGAAGCAGGAATGTCCAAATTGAGTGGCGAAATTAACCAAGCCTGGCAGACAACAAGGGATGGGACGGGACAGAGCAGCAGCAATGGAAGTGGAAACCGAAATGGTCAAGTGGAGCAATGCCCTCAGTGCGGTGCTAAGTTTTCCTCGGTCACTACTCTGGTGGATCATGTGCAAAAAGTTCATGAAAGGAATGGCAACCGATCCGGGGTGAAGAAGAATGTCGCAATTAATGCCTGTCCTAAGTGTAGTAGGGGCTTTGTGGACCCGGTTGCCCTTGTGGAGCATGTTGAGAGAGATCATGGTGGTAGTTCTAGATAG 885 0.4508 MGTPEFPDLGKHCSFSDCNLIDFLPFSCDRCNQVYCLEHRSYIKHKCTKGNKNDVTVVICPLCAKGVRLIHDQDPNITWENHVNIDCDPSNYEKATKKKKCPAPGCREILVFSNTIKCRDCMVDHCLKHRFGPDHKCPGPKVVDTSFSFMNLVSRSRKEEPKPNSTSTSTSSSRWTSLLNMASNIRASAEAGMSKLSGEINQAWQTTRDGTGQSSSNGSGNRNGQVEQCPQCGAKFSSVTTLVDHVQKVHERNGNRSGVKKNVAINACPKCSRGFVDPVALVEHVERDHGGSSR* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1306 294 Gene3D Classic Zinc Finger 195 293 - -
Aev06g1306 294 Pfam C2H2-type zinc finger 228 250 - -
Aev06g1306 294 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 1 294 - -
Aev06g1306 294 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Aev06g1306 294 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Aev06g1306 294 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Aev06g1306 294 SUPERFAMILY AN1-like Zinc finger 6 51 IPR035896 -
Aev06g1306 294 Pfam AN1-like Zinc finger 13 50 IPR000058 GO:0008270
Aev06g1306 294 Pfam AN1-like Zinc finger 101 140 IPR000058 GO:0008270
Aev06g1306 294 SMART c2h2final6 227 250 IPR013087 -
Aev06g1306 294 SMART c2h2final6 266 289 IPR013087 -
Aev06g1306 294 MobiDBLite consensus disorder prediction 207 226 - -
Aev06g1306 294 Gene3D - 2 57 IPR035896 -
Aev06g1306 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 266 294 IPR013087 -
Aev06g1306 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 227 255 IPR013087 -
Aev06g1306 294 PANTHER ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 1 294 - -
Aev06g1306 294 MobiDBLite consensus disorder prediction 154 175 - -
Aev06g1306 294 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Aev06g1306 294 ProSitePatterns Zinc finger C2H2 type domain signature. 268 289 IPR013087 -
Aev06g1306 294 ProSitePatterns Zinc finger C2H2 type domain signature. 229 250 IPR013087 -
Aev06g1306 294 SUPERFAMILY AN1-like Zinc finger 55 141 IPR035896 -
Aev06g1306 294 Gene3D - 81 150 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1306 Aev-Chr6 8767722 8769241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1306 1 294 C2H2 Transcription Factor Family AT2G41835 60.678 3.59e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g1306 zf-AN1 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1306 - - gmx:100806459 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1306 06 8767722 8769241 Aev06g1306 06 8767722 8769241 ECH