Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1295 ATGAATCACTTGACTGTTGAAACTGAAGATTCTTTTGCTAGCTTGCTTGAGCTAGCTGCCAATAATGACGTTGAAGGTTTCAAACGACTAATTGAGTGTGACCCTTCCTCAGTGGATGAGGTTGGGCTGTGGTATGGTCGCCGGAAGGGATCAAAGCAGATGGTCAACGAGCAAAGAACACCTCTAATGGTTGCTGCTACTTATGGTAGCATTGATATTATGAAACTGATTCTTTCACTGTCCGAAGCTGACATTAACCGGCCATGTGGATTTGACAAGAGCACTGCCCTTCATTGTGCCGCGTCTGGTGGGTCTGAAAATGCTGTGGATGCTGTGAAACTGCTTCTGGCAGCTGGCGCTGATTTGAATTCTGTTGATGCTAATGGGCATCGTCCAGTTGATGTTATTGTTTCTCCTCCCAAGATTGAACATGTCAAAAACAGTCTTGAAGAACTTCTTCAAACTGATGATTCTATTGCTGGGTGTAATCTGAGGGTGATCACAACCTCATTCAATACATATTCTCCTCCATTATCAACTTCACCGGAGAATGGATCCCCTTCTGCACCTGATTTCCAATTAAAGCTAAAGTCAAGTGATATCCCTGTATCTTCTGCATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCAGACATTAAGAACAGTATATATTCAACTGATGAGTTCAGAATGTATTCTTTCAAGGTCCGTCCTTGTTCACGTGCTTATTCACACGATTGGACTGAATGCCCTTTTGTGCATCCGGGAGAGAATGCTCGAAGAAGAGACCCAAGAAAGTACCATTATAGCTGTGTCCCTTGTCCCGATTTTCGGAAGGGTGCTTGCCGGCGTGGAGATATGTGTGAATATGCTCATGGGGTTTTTGAGTGCTGGCTGCATCCGGCACAATATCGAACCCGTCTTTGCAAGGATGGGACAAGTTGCTCCAGAAGAGTTTGCTTTTTTGCCCACACTGCGGAAGAGCTTCGGCCTTTATATGTTTCAACTGGTTCTGCTGTTCCATCACCTCGCTCAAGCACATCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGTTCTCCGTCCTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCCTCTGCCAATGGCATCTCACACTCATCTGTTGGTTGGCCCCAGCCTAATGTCCCAGCCTTGCATCTCCCAGGAAGCAATCTTCAGTCCAGTAGATTGAGATCTTCACTAAATGCCAGAGACATTCCTATGGATGACTTCGACTTGTTGGCCGATTATGATCAGCAGCAGCAGCTGATTAATGAGTTATCTTGTCTCTCTCCACAGCCTATGAATTCTAATCCTCTTAATCGCTCTGGTCGCATGAAGCCCCTGACTCCTTCAAATCTCGATGATCTGTTTTCAGCTGAGAGTTCTTCTCCTCGATTTGCTGATCCAGCACTGACATCAGCTGTTTTTTCTCCAACTCACAAATCAGCTGTCTTTAATCAATTTCAGCAGCAGCAAAGCTTGTTGTCACCTGTGAATACTAATTTTTCTTCAAAAAATGTTGACCATGCTTTGTTGCAGGCCTCTTTTGGGGTTCAGTCTTCAGGAAGGATGTCTCCACGAAATGTGGAGCCTATTTCTCCTATGAGCTCTAGGATTTCTATGCTAGCACAACGTGAGAAGCAGCAACAATTTCGCAGTCTTAGCTCCCGTGAACTTGGCTCCAACTCTGCTGCTGCAGCTGCTGCCTCAGCTAACTCTTGGTCAAAATGGGGATCCCCCAATGGTAGGGTGGATTGGGCAGTGGGTGCGGATGAATTAGGAGGTGGCAAGCTCCGGAGATCATCTTCGTTTGAGCTCGGGAACAATGGCGAGGAGCCTGATTTATCATGGGTGCAGTCGCTTGTTAAAGAATCTCCAACCGAGATTAAAGAGAAGTTGGCAACTAATGTCTCTAGTGGTGCAGCAGCTGGATCCTCTGCTGACGGATCAAATACCAGCACACAAATGGAATCTGTCGATCATGCTGTATTGGGAGCGTGGCTCGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAATTGA 2103 0.4627 MNHLTVETEDSFASLLELAANNDVEGFKRLIECDPSSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDIMKLILSLSEADINRPCGFDKSTALHCAASGGSENAVDAVKLLLAAGADLNSVDANGHRPVDVIVSPPKIEHVKNSLEELLQTDDSIAGCNLRVITTSFNTYSPPLSTSPENGSPSAPDFQLKLKSSDIPVSSASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCSRRVCFFAHTAEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSANGISHSSVGWPQPNVPALHLPGSNLQSSRLRSSLNARDIPMDDFDLLADYDQQQQLINELSCLSPQPMNSNPLNRSGRMKPLTPSNLDDLFSAESSSPRFADPALTSAVFSPTHKSAVFNQFQQQQSLLSPVNTNFSSKNVDHALLQASFGVQSSGRMSPRNVEPISPMSSRISMLAQREKQQQFRSLSSRELGSNSAAAAAASANSWSKWGSPNGRVDWAVGADELGGGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATNVSSGAAAGSSADGSNTSTQMESVDHAVLGAWLEQMQLDHLVAQQN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1295 700 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Aev06g1295 700 PANTHER UNKEMPT FAMILY MEMBER 1 697 IPR045234 -
Aev06g1295 700 SMART ANK_2a 92 124 IPR002110 GO:0005515
Aev06g1295 700 SMART ANK_2a 57 87 IPR002110 GO:0005515
Aev06g1295 700 SMART ANK_2a 10 40 IPR002110 GO:0005515
Aev06g1295 700 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 275 295 IPR000571 GO:0046872
Aev06g1295 700 SMART c3hfinal6 270 296 IPR000571 GO:0046872
Aev06g1295 700 SMART c3hfinal6 305 328 IPR000571 GO:0046872
Aev06g1295 700 Gene3D - 8 154 IPR036770 -
Aev06g1295 700 PANTHER ARM REPEAT CCCH-TYPE ZINC FINGER PROTEIN 1 697 - -
Aev06g1295 700 ProSiteProfiles Zinc finger C3H1-type profile. 275 297 IPR000571 GO:0046872
Aev06g1295 700 Gene3D - 272 333 - -
Aev06g1295 700 MobiDBLite consensus disorder prediction 175 194 - -
Aev06g1295 700 MobiDBLite consensus disorder prediction 653 674 - -
Aev06g1295 700 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Aev06g1295 700 Pfam Ankyrin repeats (3 copies) 18 126 IPR002110 GO:0005515
Aev06g1295 700 SUPERFAMILY Ankyrin repeat 14 142 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1295 Aev-Chr6 8641495 8643597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1295 6 693 C2H2 Transcription Factor Family AT5G12850 54.096 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev06g1295 Ank_2 6.3e-11 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1295 - - ccaj:109796653 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1295 06 8641495 8643597 Aev06g1295 06 8641495 8643597 ECH