Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1290 ATGGACACTTGCCGGAAGTCCCCCTTGAAGCCGTGGAAGAAGGGTCCAACCAGAGGGAAAGGCGGCCCCCAAAACGCCTCGTGCGAGTATCGAGGCGTTCGGCAGAGAACATGGGGAAAATGGGTTGCTGAGATCAGGGAGCCAAAGAAGAGAACCAGGCTCTGGCTCGGTTCTTTTGCCACAGCTGAGGAAGCCGCCATGGCTTATGATGAGGCTGCGAGGAGACTCTATGGACCAGATGCATATCTTAACCTGCCCCACCTGAGACCGAGCTCCAATTCAACAACAATCAAACCTGGGAAGTTCAAATGGTTGCCATCCAAGAACTTCATCTCAATGTTTCCTTCTTGTGGAATGCTCAATGTGAATGCACAACCTAGTGTTCACTTAATCCATCAGAGGCTACAACAGTTTAAGCAAAATGGGGTTGCGAGTCAATGCGCTTCTACCTCATCCAATGATCCAAAGGCAGAAGAAATTCAGAATGTGGAATGCAAAGTTAATGCAGAAGATCCACCAAAGGAGAAAACTGCTCAAACATCATCAAAGGAGGTGCTTCAGGATCTTCATGAGAAGCCACAGATAGACCTCCATGAGTTTCTTCAACAGATGGGAATTCTGAAAGGAGAAAAACAGGAAGAAAGAACTGATAGCTCGGGAAGTTCAACAGTGCCTGAAGCCATGTCGAGCGATAGCTACGATCAACTGGGAGTGTTCTCAGACAACAGTGTTAACTGGGAGGCATTGATTGAGATGCATGGAATCGCAGATATTCAGGAAACAGAACCCACCCAGATGGAAGCATATGACACTAGTGATGACCTCAATTTCTCCACTTCCATTTGGAACTTCTAA 855 0.4737 MDTCRKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLRPSSNSTTIKPGKFKWLPSKNFISMFPSCGMLNVNAQPSVHLIHQRLQQFKQNGVASQCASTSSNDPKAEEIQNVECKVNAEDPPKEKTAQTSSKEVLQDLHEKPQIDLHEFLQQMGILKGEKQEERTDSSGSSTVPEAMSSDSYDQLGVFSDNSVNWEALIEMHGIADIQETEPTQMEAYDTSDDLNFSTSIWNF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1290 284 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Aev06g1290 284 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Aev06g1290 284 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 281 - -
Aev06g1290 284 MobiDBLite consensus disorder prediction 208 234 - -
Aev06g1290 284 MobiDBLite consensus disorder prediction 1 27 - -
Aev06g1290 284 MobiDBLite consensus disorder prediction 218 234 - -
Aev06g1290 284 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Aev06g1290 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1290 Aev-Chr6 8615563 8616417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1290 5 284 AP2-EREBP Transcription Factor Family AT3G57600 50.355 3.67e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev06g1290 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1290 - - gmx:100801311 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1290 06 8615563 8616417 Aev06g1290 06 8615563 8616417 ECH