Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1289 ATGGAGAAAGGAGCCAGCACTAAGAAGAAGCCATCGCCACTCTCTCTGCAACAATTCATCACTATCACAACCCCTCTTCTTGACTTGGAAAAGGAAGCTGAGATATCGAGCTCAATTGCTACAGGAGCATCTAGGAATTTGGACACTGCTCAAAAAAGGGGCTCCACAATTCTCAACTTGAAGTGTGTGGATGTTCAGACGGGGCTTATGGGAAAATCCCTGATCGAATTCCAGTCTACAAAAGGAGATGTTCTCCCTGCACACAAGTTTAGTACACATGACGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGGCAAGGTGTAGTTTATAGATTAAAGGACTCATCAATAACTGTTGCGTTTGATGATATACCAGAAGATGGCTTAAACAGTCCCCTGAGGCTGGAAAAAGTAGCAAATGAGGTGACTTATCGCAGGATGAAAGATGCATTAATACAGTTGAGTAAAGGAGTGCATAAGGGTCCAGCTGCTGATCTGATTCCTGTCTTGTTTGGGGAGAGGCTACCAACAGTGTCCAAGAAGGATGTATCCTTCTCTCCTTTTAATACCAACCTTGATCATTCTCAGAAAGATGCAATTTCAAAAGCCCTATCATCGAAGAATGTGTTTTTGCTACATGGACCTCCTGGAACGGGAAAAACTACAACAGTGGTGGAAATTATATTACAAGAGGTGAAACGTGGATCAAAGATTCTTGCTTGTGCTGCCTCAAATATTGCTGTTGATAACATTGTTGAGCGGCTAGTTCCACATAGGGTTAAGCTGGTGAGAATAGGTCATCCTGCACGTTTATTGCCTCAAGTACTGGACAGTGCACTGGATGCTCAGGTACTACGAGGAGATAATAGTGGCCTTGCAAATGACATTCGGAAAGAAATGAAGGCATTGAATGGAAAGCTGTTGAAAACCAAAGACAAAAGTACAAGGAGGGATATACAGAAGGAACTTAGGACTCTATCCAAAGAAGAGCGTAAAAGGCAGCAGCTTGCTGTAACAGATGTAATTAAAAGTGCAGACGTAATATTAACTACTTTGATTGGGGCTTTTTCTAAGAAACTAGACAGCACCTCATTTGATTTGGTGATTATTGATGAAGCTGCTCAAGCACTTGAGATAGCATGCTGGATACCTCTGCTGAAGGGCTCAAGATGTATCCTTGCAGGGGATCATCTTCAACTTCCTCCAACCATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACCCTCTTTGAACGACTTGCAGAAATGTATGGAAATGAAGTCACATCTATGCTCACTGTCCAGTACCGTATGCACGAACTCATCATGGATTGGTCTTCTAAAGAACTTTACAACAGCAAGATTAAGGCTCATGCTAGTGTTGCTGCACATATGCTATATGATCTTGAGGATGTGAAAAGGACGCCTTCAACTGAACCAACGCTTCTTCTCATAGACATAGCTGGATGCGATATGGAAGAAAAAAAAGATGAAGAAGATAGCACCCTCAATGAAGGTGAAGCTGAGGTTGCTATGGCTCATGCAAAGAGACTAGTGCAAAGTGGTGTGCATCCTTCTGATATTGGCATCATTACCCCATATGCCGCCCAGGTTGTTTTACTCAAGATGTTGAGAAACAATGAGGACCGACTGAAGGATGTTGAAATCTCAACTGTTGATGGCTTTCAGGGAAGGGAGAAGGAAGCCATTATTATATCAATGGTCCGATCCAACTCAAAACAAGAGGTGGGCTTTCTGAGTGATCGCCGGCGAATGAATGTGGCTGTGACACGGGCAAGACGGCAATGTTGTCTTGTATGTGACACTGAGACGGTCAGCAGTGATGGATTTCTGAAGAGATTGATAGAGTATTTTGAAGAGCATGGCGAGTATCTGAGTGCCTCTGAATACCAGAATGAATAG 1947 0.4294 MEKGASTKKKPSPLSLQQFITITTPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKSLIEFQSTKGDVLPAHKFSTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHKGPAADLIPVLFGERLPTVSKKDVSFSPFNTNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRIGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDKSTRRDIQKELRTLSKEERKRQQLAVTDVIKSADVILTTLIGAFSKKLDSTSFDLVIIDEAAQALEIACWIPLLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGNEVTSMLTVQYRMHELIMDWSSKELYNSKIKAHASVAAHMLYDLEDVKRTPSTEPTLLLIDIAGCDMEEKKDEEDSTLNEGEAEVAMAHAKRLVQSGVHPSDIGIITPYAAQVVLLKMLRNNEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKQEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHGEYLSASEYQNE* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1289 648 Coils Coil 299 319 - -
Aev06g1289 648 Gene3D - 444 648 IPR027417 -
Aev06g1289 648 SMART ultradead3 194 453 IPR014001 -
Aev06g1289 648 CDD DEXXQc_SMUBP2 197 445 - -
Aev06g1289 648 Pfam AAA domain 198 412 IPR041677 GO:0004386
Aev06g1289 648 CDD SF1_C_Upf1 446 634 IPR041679 -
Aev06g1289 648 SMART AAA_5 212 464 IPR003593 -
Aev06g1289 648 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 1 646 - -
Aev06g1289 648 TIGRFAM TIGR00376: putative DNA helicase 346 641 IPR004483 GO:0003677|GO:0005524
Aev06g1289 648 Pfam AAA domain 421 617 IPR041679 -
Aev06g1289 648 PANTHER HELICASE WITH ZINC FINGER 2 1 646 - -
Aev06g1289 648 Gene3D - 24 428 IPR027417 -
Aev06g1289 648 Gene3D - 42 144 - -
Aev06g1289 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 634 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1289 Aev-Chr6 8608850 8614551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1289 189 381 Core DNA Replication Machinery Family AT1G08840 27.979 7.43e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1289 K19036 - gsj:114399949 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1289 06 8608850 8614551 Aev06g1289 06 8608850 8614551 ECH